Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294451
Identifier: 145294451
GI number: 145294451
Start: 442267
End: 443499
Strand: Direct
Name: 145294451
Synonym: cgR_0406
Alternate gene names: NA
Gene position: 442267-443499 (Clockwise)
Preceding gene: 145294450
Following gene: 145294452
Centisome position: 13.34
GC content: 52.39
Gene sequence:
>1233_bases ATGGGGGTGTCCGCGTTTAACATATCTGACATGGTGGCGAACAAACGGGCACAGCGTAAAGTCTGGCTGGCGGTAGCTTT ATCGGTCTTTACGGTCGCGTGGGGTGGTAATGAATTCACTCCCTTGCTGGTGTTTTATCGGGGTGAAGGGTTCTTCAGCA ACCTGTTCATCGACCTTTTGCTGGTGTTTTATGCCATCGGAGTAGCGGTAGGTTTGCTGGCAGCTGGTCCTTTATCTGAC CGCTATGGCCGACGCGCTGTCATGTTGCCTGCGCCATTGATCGCGATCTTGGGTTCCGCGTTGATTGCCTTAGGTGAAGA AACCGCCATCCTGATTGCCATTGGTCGAGTGCTGTCGGGAATTTCGGTGGGCATGGTGATGACAGTGGGAGGTTCCTGGA TTAAGGAGCTTTCATCGTCGCGGTTTGAGCCAGGGGTGAAAACCAGTGCTGGTGCAAAACGCGCATCGATGTCTTTGACC GGCGGTTTTGCGCTCGGCCCAGCGCTTGCTGGTGTGATGGCACAGTGGCTGCCACTACCTGGACAGTTGGCATATGTTTT GCACATTATTCTCACTCTGATTTTGTTCCCGTTGCTTATTACAGCGCCGGAAACTCGTCAATCAGCGCACCTGAAAACTA AGGGATCATTCTGGTCAGATGTGCTTGTGCCATCTGCACTAGACAAGCGATTCTTGTTTGTTGTTGCTCCAATTGGACCG TGGGTTTTCGGTGCGGCCTTCACTGCCTACGCAGTTTTGCCGTCGCAGCTGCGTGACATGGTTTCTGCACCCGTTGCGTA TTCTGCGCTGATCGCTTTGGTTACCTTAGGTTCTGGATTTGGTATCCAACAATTCGGTCCTCAAATCATGGGCACCTCTA AAACTCGCGGGCCGATTTTGGCCATGTTCGTCACAGTCATCGGCATGATCGGCGCGGTGATCGTGGTGATGAACCCTCAT CCATGGTGGGCGCTAGTTGTCTGCATGGCCCTCGGTCTGTCTTATGGCCTGTGCATGTTCATGGGTTTGGCGGAAACTCA AAACATTGCGCCACCTGTTGATATGGCAGGCCTGACGGGTATTTTCTACTGCCTGACGTACGTAGGTATGGTCTTTCCAG CGTTGATGACCTGGTTGAATCAATGGCTCAGTTACCCGTTCATGCTGGGCTTTGGTGCGGTGATGGCAACTATTTGTCTG ATCATTGTGAGTTTTAGTGCACGCCGATTCTGA
Upstream 100 bases:
>100_bases TCATCCTTCCTTAGCTCGCGTGAGCTTCCCAAGCGTAAGCACCCCCGTGTGAGGGCATAACGGCCGTTCTGTTAAAGATT GGTCTGGCCATTTCCTCCAT
Downstream 100 bases:
>100_bases GAAACAACTAAAGTGAGCCACATGCGCACAGTAGTTACCGGCGGTGCCGGCTTCATCGGATCCCATCTCGTTGACCTTTT GATCAAGGAAGGCCACGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; MFS Transporter; Facilitator Superfamily Multidrug Resistance Protein; Facilitator Superfamily Permease; Mfs Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter; Transporter Protein; Arabinose Efflux Permease Family Protein; Facilitator Transporter; Permease Facilitator Family Protein; Permease Of Facilitator Superfamily; MFS Family Transporter; Facilitator Family Permease
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGVSAFNISDMVANKRAQRKVWLAVALSVFTVAWGGNEFTPLLVFYRGEGFFSNLFIDLLLVFYAIGVAVGLLAAGPLSD RYGRRAVMLPAPLIAILGSALIALGEETAILIAIGRVLSGISVGMVMTVGGSWIKELSSSRFEPGVKTSAGAKRASMSLT GGFALGPALAGVMAQWLPLPGQLAYVLHIILTLILFPLLITAPETRQSAHLKTKGSFWSDVLVPSALDKRFLFVVAPIGP WVFGAAFTAYAVLPSQLRDMVSAPVAYSALIALVTLGSGFGIQQFGPQIMGTSKTRGPILAMFVTVIGMIGAVIVVMNPH PWWALVVCMALGLSYGLCMFMGLAETQNIAPPVDMAGLTGIFYCLTYVGMVFPALMTWLNQWLSYPFMLGFGAVMATICL IIVSFSARRF
Sequences:
>Translated_410_residues MGVSAFNISDMVANKRAQRKVWLAVALSVFTVAWGGNEFTPLLVFYRGEGFFSNLFIDLLLVFYAIGVAVGLLAAGPLSD RYGRRAVMLPAPLIAILGSALIALGEETAILIAIGRVLSGISVGMVMTVGGSWIKELSSSRFEPGVKTSAGAKRASMSLT GGFALGPALAGVMAQWLPLPGQLAYVLHIILTLILFPLLITAPETRQSAHLKTKGSFWSDVLVPSALDKRFLFVVAPIGP WVFGAAFTAYAVLPSQLRDMVSAPVAYSALIALVTLGSGFGIQQFGPQIMGTSKTRGPILAMFVTVIGMIGAVIVVMNPH PWWALVVCMALGLSYGLCMFMGLAETQNIAPPVDMAGLTGIFYCLTYVGMVFPALMTWLNQWLSYPFMLGFGAVMATICL IIVSFSARRF >Mature_409_residues GVSAFNISDMVANKRAQRKVWLAVALSVFTVAWGGNEFTPLLVFYRGEGFFSNLFIDLLLVFYAIGVAVGLLAAGPLSDR YGRRAVMLPAPLIAILGSALIALGEETAILIAIGRVLSGISVGMVMTVGGSWIKELSSSRFEPGVKTSAGAKRASMSLTG GFALGPALAGVMAQWLPLPGQLAYVLHIILTLILFPLLITAPETRQSAHLKTKGSFWSDVLVPSALDKRFLFVVAPIGPW VFGAAFTAYAVLPSQLRDMVSAPVAYSALIALVTLGSGFGIQQFGPQIMGTSKTRGPILAMFVTVIGMIGAVIVVMNPHP WWALVVCMALGLSYGLCMFMGLAETQNIAPPVDMAGLTGIFYCLTYVGMVFPALMTWLNQWLSYPFMLGFGAVMATICLI IVSFSARRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43736; Mature: 43605
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSAFNISDMVANKRAQRKVWLAVALSVFTVAWGGNEFTPLLVFYRGEGFFSNLFIDLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH LVFYAIGVAVGLLAAGPLSDRYGRRAVMLPAPLIAILGSALIALGEETAILIAIGRVLSG HHHHHHHHHHHHHHCCCCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC ISVGMVMTVGGSWIKELSSSRFEPGVKTSAGAKRASMSLTGGFALGPALAGVMAQWLPLP HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCEEECCCHHHHHHHHHHHHHHCCCC GQLAYVLHIILTLILFPLLITAPETRQSAHLKTKGSFWSDVLVPSALDKRFLFVVAPIGP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCEEEEEECCCH WVFGAAFTAYAVLPSQLRDMVSAPVAYSALIALVTLGSGFGIQQFGPQIMGTSKTRGPIL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCHHCCCCCCCCHHH AMFVTVIGMIGAVIVVMNPHPWWALVVCMALGLSYGLCMFMGLAETQNIAPPVDMAGLTG HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IFYCLTYVGMVFPALMTWLNQWLSYPFMLGFGAVMATICLIIVSFSARRF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GVSAFNISDMVANKRAQRKVWLAVALSVFTVAWGGNEFTPLLVFYRGEGFFSNLFIDLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH LVFYAIGVAVGLLAAGPLSDRYGRRAVMLPAPLIAILGSALIALGEETAILIAIGRVLSG HHHHHHHHHHHHHHCCCCCHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC ISVGMVMTVGGSWIKELSSSRFEPGVKTSAGAKRASMSLTGGFALGPALAGVMAQWLPLP HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCEEECCCHHHHHHHHHHHHHHCCCC GQLAYVLHIILTLILFPLLITAPETRQSAHLKTKGSFWSDVLVPSALDKRFLFVVAPIGP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCEEEEEECCCH WVFGAAFTAYAVLPSQLRDMVSAPVAYSALIALVTLGSGFGIQQFGPQIMGTSKTRGPIL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCHHCCCCCCCCHHH AMFVTVIGMIGAVIVVMNPHPWWALVVCMALGLSYGLCMFMGLAETQNIAPPVDMAGLTG HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IFYCLTYVGMVFPALMTWLNQWLSYPFMLGFGAVMATICLIIVSFSARRF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA