Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294386
Identifier: 145294386
GI number: 145294386
Start: 378128
End: 378382
Strand: Direct
Name: 145294386
Synonym: cgR_0341
Alternate gene names: NA
Gene position: 378128-378382 (Clockwise)
Preceding gene: 145294385
Following gene: 145294393
Centisome position: 11.41
GC content: 52.55
Gene sequence:
>255_bases TTGTCTGTGGAATCCATCGCTGAGGTGGGCGCTGATATGTCGCAAGGAATTCCCAAAGCGATCGATCCGGAGCTGCTGCG CACTGTCGATCGTGTGGTCATTTTGGGCGATGACGCACAGGTAGATATGCCTGAATCTGCACAGGGCGCTCTTGAGCGTT GGTCAATTGAGGAACCGGATGCTCAAGGTATGGAACGTATGCGTATTGTGCGGGATCAGATCGATAACCGAGTCCAAGCT TTGCTAGCGGAATAA
Upstream 100 bases:
>100_bases CGGAAAATCACAGATGGCGGCGTCGCTGGCACAGAAGTATGCATCAGATTCAGTAGAGATCCATTCTGCTGGAACCAAGC CTGCACAGGGGCTAAACTAA
Downstream 100 bases:
>100_bases TTACCGAAAAAGGGGCATGTCAGCAATAACTTGTTGGCACGCCCCTTTTTTTCTAAAAGCAGTTTATTTGGATCGTCTGT TATCCACTACGGTCACACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Tyrosine-Phosphatase; Protein-Tyrosine Phosphatase Low Molecular Weight; Reductase; Low Molecular Weight Protein-Tyrosine-Phosphatase; Low Molecular Weight Phosphotyrosine Protein Phosphatase
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVDMPESAQGALERWSIEEPDAQGMERMRIVRDQIDNRVQA LLAE
Sequences:
>Translated_84_residues MSVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVDMPESAQGALERWSIEEPDAQGMERMRIVRDQIDNRVQA LLAE >Mature_83_residues SVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVDMPESAQGALERWSIEEPDAQGMERMRIVRDQIDNRVQAL LAE
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9277; Mature: 9145
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVDMPESAQGALERWSIEEPD CCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCCCC AQGMERMRIVRDQIDNRVQALLAE HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVESIAEVGADMSQGIPKAIDPELLRTVDRVVILGDDAQVDMPESAQGALERWSIEEPD CHHHHHHHCCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCCCC AQGMERMRIVRDQIDNRVQALLAE HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA