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The map label for this gene is rutC [H]

Identifier: 145294275

GI number: 145294275

Start: 246784

End: 247098

Strand: Direct

Name: rutC [H]

Synonym: cgR_0231

Alternate gene names: 145294275

Gene position: 246784-247098 (Clockwise)

Preceding gene: 145294273

Following gene: 145294276

Centisome position: 7.45

GC content: 51.43

Gene sequence:

>315_bases
TTGCACATTTCAGGAATGGTGGCTTTTGATTCTGACGCGAATATTGTCGGCGAAGGGGACATCGAAGCGCAGACTGAACA
AGTCTTTAGGAACCTGCAAGCAGTAGTTGAGGAGGCAGGTGGAACGATCAACAACATTGTTTCCACCACTACTTATCTTG
CCGATGTCACCGATGCTCCCGTTGTTAACGCTGCTCGCTCCCGCTATTTCACCGGAGAAGTATTGCCCACCCACACCGTA
ATTGGAGTTGCTGCTCTTGCTCGGCCACAGTTGCTAGTCGAGATCTCAGCGGTGGCCTATTTGGGGGACCTTTAG

Upstream 100 bases:

>100_bases
AACCCAGTCGAATTCAGTGTCCGCGGTAATCCCTGTGCAGCTCCCTCCATGACCTGCTGAACGCACTGTTTATTCCTACG
GTGTTCGCGCAGGGGATCAG

Downstream 100 bases:

>100_bases
TTTTCTCCAGAGGCATTAGAGCATTGCTTGAAAAAGGGCTAATGAGATTCTTGTGCTTTTGTCTAGGTAATTCCCAAACA
AGTAGACGAAAGAATACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MHISGMVAFDSDANIVGEGDIEAQTEQVFRNLQAVVEEAGGTINNIVSTTTYLADVTDAPVVNAARSRYFTGEVLPTHTV
IGVAALARPQLLVEISAVAYLGDL

Sequences:

>Translated_104_residues
MHISGMVAFDSDANIVGEGDIEAQTEQVFRNLQAVVEEAGGTINNIVSTTTYLADVTDAPVVNAARSRYFTGEVLPTHTV
IGVAALARPQLLVEISAVAYLGDL
>Mature_104_residues
MHISGMVAFDSDANIVGEGDIEAQTEQVFRNLQAVVEEAGGTINNIVSTTTYLADVTDAPVVNAARSRYFTGEVLPTHTV
IGVAALARPQLLVEISAVAYLGDL

Specific function: May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019898 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 10961; Mature: 10961

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISGMVAFDSDANIVGEGDIEAQTEQVFRNLQAVVEEAGGTINNIVSTTTYLADVTDAP
CCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
VVNAARSRYFTGEVLPTHTVIGVAALARPQLLVEISAVAYLGDL
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHISGMVAFDSDANIVGEGDIEAQTEQVFRNLQAVVEEAGGTINNIVSTTTYLADVTDAP
CCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
VVNAARSRYFTGEVLPTHTVIGVAALARPQLLVEISAVAYLGDL
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA