Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294259
Identifier: 145294259
GI number: 145294259
Start: 232356
End: 234017
Strand: Direct
Name: 145294259
Synonym: cgR_0215
Alternate gene names: NA
Gene position: 232356-234017 (Clockwise)
Preceding gene: 145294257
Following gene: 145294262
Centisome position: 7.01
GC content: 55.11
Gene sequence:
>1662_bases ATGACTCTTCAGAGTTCTGATAAACGTTCTCCTTCACTGTTAGACGCCTCCTCCGAGGTCTTTGTCCATGATTTGGCAGC TTTGTCTCCCACTGATGCCACTGCATGGGGTATCTCAGGCTTCGAAGGTGAGCTTCAGGATTTCTCTCCTGACTATTGGA ATGCCATCGCCGAACGCAACCGCGACATGGTTGCCGATGTTGATGCTTTTGATGACGGCACTGATGACAACGATGACGAA GAAGATTTCGATGACGTTGACCGCGTCACAGCTGATGTTCTCCGTGATCGTGTATGCCTGGATCTGGCCCTGCACCACCA GGGCGAAACTTTAGCGAATCTCAACAACATTGATTCCCCAGTCCAGACCATCCGCGATACCTTCCTCATCATGCCCCGCG AGACGGACGATGATGTGGAAAATCTCCGCGAACGTCTCTCCCGCGTCCCCGATGCTCTCCACGGATACTGTGAATCACTC GCTGAGGCTGCCAGCCAAGGCCATGTTGCAGCGGTCCGCCAGGTGGAAGAAGTGGTGTCGCAATGTGAGGACCTCGCTGA TGAGGACTCCGTTTTGCAGCACCTTGGCTTGGATGAACATGACCCCGTAGTTGTAGAGGCCCAGGAAGCTTTTGCACGCG TTGCCGGTTGGTTAGCAGAGCAACTGGCTCCGCATGCTCCTCATGTGGATGCGGTTGGCCGGGATCGCTATGAAATGTTC TCCCACCTGCACGTCGGCGAGTTTGTAGATCTGGATGAGGCTTACCAATGGTCCCTGGAACAGCTGCGTGACATTGATGC TCAGCAGCTTCAGGTAGCCCAGCAGCTGTACGGCCCTGGCACCACGATCCGTGAGGCCATGAAGAAGCTCAATGCTGATG AGCGCTACCTCATCCGAGGCACTGATGCTCTGCAGGAGTGGATGCAAAAGACCGCTGATCAGGCAATCGCTGATCTAGAT GGCGTTTCCTTCAACATTCCAGAGCAGGCTCGACAGGTTGAGTGCCTCATCGATCCTGCTGGAACTGGCGGCATTTTCTA CACCCCACCAAGTGATGATTTCTCCAGGCCTGGCCGCATGTGGTGGTCTGTGCCTAAAACCCAGGAAGTCTTCCACACCT GGCAAGAGCTCACCACCGTGTTCCACGAGGGTGTTCCTGGCCACCACCTGCAGATCTCCCAAACTTTGGTGGAAAAGGAT CTGAACCTGTGGCGTCGAGTCGCTTGCTGGAACTCTGGCCACGGTGAAGGTTGGGCGCTGTACGCAGAATCCCTCATGAA GGAATTGGGATACCACGAAGATCCAGGCAACCTCATGGGCTACCTTGATGCTCAGCGACTCCGTGCAGCCCGCGTGGCCA TTGACATCGGAATTCACCTGAACAAGAGGAACCCAGAGTGCACCGGCCTGTGGGATGCGTCTTATGCGCGCAGCTTCCTG CGTGAAAATACGTCCATGAATGAAGATGCGCTGTACTTTGAGCTCAACCGTTACCTTGGTTGGCCAGGTCAGGCCGCATC GTATGCCATTGGTCAGCGACTCTGGTTGAACCTGCGCGATGAGGCCATTAGCCAGGGGCAAACCTTGGCGCAATTCCACA GCAAGGCATTGTCTTATGGCAGCATCCCAATGGGCATTTTGCGCGATCAGGTGCTGAACTAG
Upstream 100 bases:
>100_bases AAATCATAGCGTGAGATGACAAGGAAAGGAATATTTCGATCCGGCAACAACCCCCGCGTCAGGTGGGATTATGCCGAAAA AATCGCTACGATAGCCACTT
Downstream 100 bases:
>100_bases AAGGCCTTTAACGATCCCTACGCAAAATGCGTCGCAGTAGCGTGGGGATCAAACCGGCGATGGTCAAGATTGCCAGTAGT CGAATGATCTGGATCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTLQSSDKRSPSLLDASSEVFVHDLAALSPTDATAWGISGFEGELQDFSPDYWNAIAERNRDMVADVDAFDDGTDDNDDE EDFDDVDRVTADVLRDRVCLDLALHHQGETLANLNNIDSPVQTIRDTFLIMPRETDDDVENLRERLSRVPDALHGYCESL AEAASQGHVAAVRQVEEVVSQCEDLADEDSVLQHLGLDEHDPVVVEAQEAFARVAGWLAEQLAPHAPHVDAVGRDRYEMF SHLHVGEFVDLDEAYQWSLEQLRDIDAQQLQVAQQLYGPGTTIREAMKKLNADERYLIRGTDALQEWMQKTADQAIADLD GVSFNIPEQARQVECLIDPAGTGGIFYTPPSDDFSRPGRMWWSVPKTQEVFHTWQELTTVFHEGVPGHHLQISQTLVEKD LNLWRRVACWNSGHGEGWALYAESLMKELGYHEDPGNLMGYLDAQRLRAARVAIDIGIHLNKRNPECTGLWDASYARSFL RENTSMNEDALYFELNRYLGWPGQAASYAIGQRLWLNLRDEAISQGQTLAQFHSKALSYGSIPMGILRDQVLN
Sequences:
>Translated_553_residues MTLQSSDKRSPSLLDASSEVFVHDLAALSPTDATAWGISGFEGELQDFSPDYWNAIAERNRDMVADVDAFDDGTDDNDDE EDFDDVDRVTADVLRDRVCLDLALHHQGETLANLNNIDSPVQTIRDTFLIMPRETDDDVENLRERLSRVPDALHGYCESL AEAASQGHVAAVRQVEEVVSQCEDLADEDSVLQHLGLDEHDPVVVEAQEAFARVAGWLAEQLAPHAPHVDAVGRDRYEMF SHLHVGEFVDLDEAYQWSLEQLRDIDAQQLQVAQQLYGPGTTIREAMKKLNADERYLIRGTDALQEWMQKTADQAIADLD GVSFNIPEQARQVECLIDPAGTGGIFYTPPSDDFSRPGRMWWSVPKTQEVFHTWQELTTVFHEGVPGHHLQISQTLVEKD LNLWRRVACWNSGHGEGWALYAESLMKELGYHEDPGNLMGYLDAQRLRAARVAIDIGIHLNKRNPECTGLWDASYARSFL RENTSMNEDALYFELNRYLGWPGQAASYAIGQRLWLNLRDEAISQGQTLAQFHSKALSYGSIPMGILRDQVLN >Mature_552_residues TLQSSDKRSPSLLDASSEVFVHDLAALSPTDATAWGISGFEGELQDFSPDYWNAIAERNRDMVADVDAFDDGTDDNDDEE DFDDVDRVTADVLRDRVCLDLALHHQGETLANLNNIDSPVQTIRDTFLIMPRETDDDVENLRERLSRVPDALHGYCESLA EAASQGHVAAVRQVEEVVSQCEDLADEDSVLQHLGLDEHDPVVVEAQEAFARVAGWLAEQLAPHAPHVDAVGRDRYEMFS HLHVGEFVDLDEAYQWSLEQLRDIDAQQLQVAQQLYGPGTTIREAMKKLNADERYLIRGTDALQEWMQKTADQAIADLDG VSFNIPEQARQVECLIDPAGTGGIFYTPPSDDFSRPGRMWWSVPKTQEVFHTWQELTTVFHEGVPGHHLQISQTLVEKDL NLWRRVACWNSGHGEGWALYAESLMKELGYHEDPGNLMGYLDAQRLRAARVAIDIGIHLNKRNPECTGLWDASYARSFLR ENTSMNEDALYFELNRYLGWPGQAASYAIGQRLWLNLRDEAISQGQTLAQFHSKALSYGSIPMGILRDQVLN
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62237; Mature: 62106
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQSSDKRSPSLLDASSEVFVHDLAALSPTDATAWGISGFEGELQDFSPDYWNAIAERN CCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCC RDMVADVDAFDDGTDDNDDEEDFDDVDRVTADVLRDRVCLDLALHHQGETLANLNNIDSP CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH VQTIRDTFLIMPRETDDDVENLRERLSRVPDALHGYCESLAEAASQGHVAAVRQVEEVVS HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QCEDLADEDSVLQHLGLDEHDPVVVEAQEAFARVAGWLAEQLAPHAPHVDAVGRDRYEMF HHHHCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SHLHVGEFVDLDEAYQWSLEQLRDIDAQQLQVAQQLYGPGTTIREAMKKLNADERYLIRG HHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEC TDALQEWMQKTADQAIADLDGVSFNIPEQARQVECLIDPAGTGGIFYTPPSDDFSRPGRM CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCEEECCCCCCCCCCCCE WWSVPKTQEVFHTWQELTTVFHEGVPGHHLQISQTLVEKDLNLWRRVACWNSGHGEGWAL EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YAESLMKELGYHEDPGNLMGYLDAQRLRAARVAIDIGIHLNKRNPECTGLWDASYARSFL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCHHHHHHHH RENTSMNEDALYFELNRYLGWPGQAASYAIGQRLWLNLRDEAISQGQTLAQFHSKALSYG HHCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCC SIPMGILRDQVLN CCCHHHHHHHHCC >Mature Secondary Structure TLQSSDKRSPSLLDASSEVFVHDLAALSPTDATAWGISGFEGELQDFSPDYWNAIAERN CCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCC RDMVADVDAFDDGTDDNDDEEDFDDVDRVTADVLRDRVCLDLALHHQGETLANLNNIDSP CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH VQTIRDTFLIMPRETDDDVENLRERLSRVPDALHGYCESLAEAASQGHVAAVRQVEEVVS HHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QCEDLADEDSVLQHLGLDEHDPVVVEAQEAFARVAGWLAEQLAPHAPHVDAVGRDRYEMF HHHHCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SHLHVGEFVDLDEAYQWSLEQLRDIDAQQLQVAQQLYGPGTTIREAMKKLNADERYLIRG HHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEC TDALQEWMQKTADQAIADLDGVSFNIPEQARQVECLIDPAGTGGIFYTPPSDDFSRPGRM CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCEEECCCCCCCCCCCCE WWSVPKTQEVFHTWQELTTVFHEGVPGHHLQISQTLVEKDLNLWRRVACWNSGHGEGWAL EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YAESLMKELGYHEDPGNLMGYLDAQRLRAARVAIDIGIHLNKRNPECTGLWDASYARSFL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCHHHHHHHH RENTSMNEDALYFELNRYLGWPGQAASYAIGQRLWLNLRDEAISQGQTLAQFHSKALSYG HHCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCC SIPMGILRDQVLN CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA