Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yicG [C]
Identifier: 145294256
GI number: 145294256
Start: 230756
End: 231475
Strand: Direct
Name: yicG [C]
Synonym: cgR_0212
Alternate gene names: 145294256
Gene position: 230756-231475 (Clockwise)
Preceding gene: 145294254
Following gene: 145294257
Centisome position: 6.96
GC content: 55.0
Gene sequence:
>720_bases ATGGATCTTGCACTGGCTCAGGTTGATTCCACCGTTTCGGGGCTTTATGACGCCCTCGATCTCATCGGCGTGCTGCTGAA CGGAATAATCGGTGGAACGATCGCCAGGCAACGAGGCTATGACATCATTGGCTTTCTGTTCCTGGCGTTATTTTCTGCGC TGGGTGGCGGAATGATCCGTGACATGCTGATTCAGCAGGGGACTGTCGCGGCGATCGATAATCAGATCTACCTTGCGCTC GCGTTTTCTGGCGCGCTGATTGCCATGGCGGTGAACTTTAAAGGCAGGGTGTGGGAGCTGTTTAAAGTTCACGGCGATGC CATTGTGTTGGGAGTCTGGGCGGTGACGGGTTCCGTGAAGGCGATGAATGCGGGGGTGGCTCCGCTGCCGAGTATTTTCA TGGGCGTGCTCACCGCGGTGGGTGGTGGCATGGTGCGTGATGTGGTCACTGGCCAGACGCCGACGATTTTTGGTGGCGGG ACTCTTTACGCTGTGCCTGCGACGCTTTCTGCCACGTCAATGGTTATTTTTCATAGCTTTGACCAGGTAATTCTGGGTAT GATTATTTCACCGTTCTTGGGTATCGCGTTGGCGGTTACTGCGTATTGGTGCGGTTGGGTCATTCCGGTGAACACGGATT TCGCGCCGGTGAATCTGACGGTCAGTCAATTGCGGGCGATGCTGTCCAAAGCGGAGCGCAAAGATAAGGACCAGAAATGA
Upstream 100 bases:
>100_bases GCTTTGCATATGTCTGGATCTTATTGGATGTATGAGTCAGAGATCAGGGAGATCGCGCACTAACCGAACCTGGCCAGTGC AACAGGATTATGTTTAAAGC
Downstream 100 bases:
>100_bases AAACTTATCCAGTACTAATTGCGGTGGCAGGGTTGGCACTTGCTGGGTGTAGCTCGTCGGCTCCTGGAATCTGGCGTGCC ACTGAACCCGCAGATGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MDLALAQVDSTVSGLYDALDLIGVLLNGIIGGTIARQRGYDIIGFLFLALFSALGGGMIRDMLIQQGTVAAIDNQIYLAL AFSGALIAMAVNFKGRVWELFKVHGDAIVLGVWAVTGSVKAMNAGVAPLPSIFMGVLTAVGGGMVRDVVTGQTPTIFGGG TLYAVPATLSATSMVIFHSFDQVILGMIISPFLGIALAVTAYWCGWVIPVNTDFAPVNLTVSQLRAMLSKAERKDKDQK
Sequences:
>Translated_239_residues MDLALAQVDSTVSGLYDALDLIGVLLNGIIGGTIARQRGYDIIGFLFLALFSALGGGMIRDMLIQQGTVAAIDNQIYLAL AFSGALIAMAVNFKGRVWELFKVHGDAIVLGVWAVTGSVKAMNAGVAPLPSIFMGVLTAVGGGMVRDVVTGQTPTIFGGG TLYAVPATLSATSMVIFHSFDQVILGMIISPFLGIALAVTAYWCGWVIPVNTDFAPVNLTVSQLRAMLSKAERKDKDQK >Mature_239_residues MDLALAQVDSTVSGLYDALDLIGVLLNGIIGGTIARQRGYDIIGFLFLALFSALGGGMIRDMLIQQGTVAAIDNQIYLAL AFSGALIAMAVNFKGRVWELFKVHGDAIVLGVWAVTGSVKAMNAGVAPLPSIFMGVLTAVGGGMVRDVVTGQTPTIFGGG TLYAVPATLSATSMVIFHSFDQVILGMIISPFLGIALAVTAYWCGWVIPVNTDFAPVNLTVSQLRAMLSKAERKDKDQK
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 25142; Mature: 25142
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLALAQVDSTVSGLYDALDLIGVLLNGIIGGTIARQRGYDIIGFLFLALFSALGGGMIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH DMLIQQGTVAAIDNQIYLALAFSGALIAMAVNFKGRVWELFKVHGDAIVLGVWAVTGSVK HHHHCCCCEEEECCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCEEEEEEEHHHCCHH AMNAGVAPLPSIFMGVLTAVGGGMVRDVVTGQTPTIFGGGTLYAVPATLSATSMVIFHSF ECCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCEEEEECCHHCHHHHHHHHHH DQVILGMIISPFLGIALAVTAYWCGWVIPVNTDFAPVNLTVSQLRAMLSKAERKDKDQK HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDLALAQVDSTVSGLYDALDLIGVLLNGIIGGTIARQRGYDIIGFLFLALFSALGGGMIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH DMLIQQGTVAAIDNQIYLALAFSGALIAMAVNFKGRVWELFKVHGDAIVLGVWAVTGSVK HHHHCCCCEEEECCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCEEEEEEEHHHCCHH AMNAGVAPLPSIFMGVLTAVGGGMVRDVVTGQTPTIFGGGTLYAVPATLSATSMVIFHSF ECCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCEEEEECCHHCHHHHHHHHHH DQVILGMIISPFLGIALAVTAYWCGWVIPVNTDFAPVNLTVSQLRAMLSKAERKDKDQK HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]