Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294248
Identifier: 145294248
GI number: 145294248
Start: 222514
End: 224247
Strand: Direct
Name: 145294248
Synonym: cgR_0204
Alternate gene names: NA
Gene position: 222514-224247 (Clockwise)
Preceding gene: 145294247
Following gene: 145294249
Centisome position: 6.71
GC content: 59.23
Gene sequence:
>1734_bases GTGCCCATCGTCAAACCAATGCCGGCCCTGCCCAGGCGCGCGCCCGTCCTGGCGAGTTCGCAGATCGAAGGGTTTGAACA CCGTAGAGGGTGGCGTCGACAAGCAAATTTCTGGTTTGCTGCAAGCCTTGCCCTGTACTGGTGCGCCGCGCTGTGGATCG CGCTGGACGTTGGGTATTTCTGGGGCGACGCGCTCTCGCGCACCCAAGGCGCCCTATCCGCGCTGTACTCGCGCAACCCC ACGTTGTCGGCGATCGGTTACGTGTTTACCCCTCTGACCACCGTGGTGCAGATTCCATTGGTGGCGCTGAGCCCCTGGGT CCCGGAATTCACGCGCGCCGGGTTGGCAGGCGCATTGGTGTCATCAGTGTTCATGGCGGCTTCAGTGAGGCAATTGTGGT TGATTGCCAGCGAGCGCAACATCCGGTATTGGCTCGCGGTGGTAGGCCTTCTGTTGTATGCACTTAACCCAATGATCATC CTGTACGGCGCGACGGGAATGAGCGAAGCTCCGTTCATTTACGCCACTCTCTGGGCGGTGCGCAGGCTGATTCGCTGGAC TTCTACCGACGACGTCCACGACCTCATTACCTGTGGTTTTGCGTTGGCATTGGCGTTTTTAGCGCGCTATGACGCCCTCA TCATGGCCTTCGTAGCCATGTGGACTGTCGGATTTATGACATGGCGCGCACGCTACCGCCGTGGCTTCCGCGACCGCATC GGATTCGCACTTGTCGACATGCTGCTCCTCGTCTGGCCGATCGGCTTCGCCTTCGTCGCCTGGACTGGCGCCAGCTGGCT CACCACCGGCGAACTCTTTGCCCAATTCACCTCCACAGACGGCAACGCTGCGATCATCGCAGCATCCGGCGGCGGCGCCA CAGGGCCCCAAGCGCTTTTCGACGCCTCCGTCCGCACCTTCCTCATCTCCCCAGCTCTCCTACTCGTCGCAGTAGTTGCA GTCTTTTTTGCTTATCGACGCCGCGACCCCGAACCCATCATCCCCTTAGCTCTCATCGGCTCCGTGGTCTTCTTCCAAAT CATCACCTACTCACTTGGATCCACCTTCGGCCTGCTGCGCTTTTTCCTCACCGCCCTGCCACTCACCATTATTCTGCTGT TCCAAATTATCCCGCCCCGCCACCGATTCCCCTCACTTCGACCAGGTGCTTGCTACCGCGATCGCGTCACCGGCAAGTAC GCGCCCAAAAAAATCACCGGTGTCTTAGTTCTCGCGATCTTCGGTGGCACCGGCATCACCCTGTACGGCATGAGCAGTGC TAACTGGGCGCCCCAGGAATACGCCATCCAAGAACTAGTTTTCAACATGGAATCGCCATCGCAGGACGCCGTCCACACCC TGAACACCTTCTCCACTGAAATGGATGTCGCCGATTTCGTCGACTCCCTCAACCTTGGAGACGGCGAAGTCCTTCTCTCC ACCACCTACGGCTTCGCCGTCCTCACCGCATCAAACAACCAAAAGCAATTCATCATCCCCTCCGACGAAGACTTCATCAC CACCCTCAACGAACCCGCTGAGCACGGCGTTAAGTACATCCTCGCCCTCCCACGCGAAGGTCGCGGCGCCACCGACCCGA TCAACCTGCGCTACCCAGACATGTATGAAACCGGCAGCCACATCGCCACGATGGAAATCGAATTCATCAATCAAGGCCAA GGACAACCAAATTGGCGCCTCTATCGGGTGCTCACCACCCCCGAACAGTCGTAG
Upstream 100 bases:
>100_bases TTGGCTGCTCATGAGCATTGCAGCGTTGAAAGGCACGTGGCAATTGATCACGCGACCATCCTATTGGGAGAAAACTGCCC ACGGATTGGAGGCGTAAGCG
Downstream 100 bases:
>100_bases ACTCTTTGTAACTACCGTTGTTGTTTTTCCATATCCAGGAGAGTCATGGCCCGCAAGCTGAAGGACAAACTTCCCCGAAA TTTTGACAAAATCGTCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MPIVKPMPALPRRAPVLASSQIEGFEHRRGWRRQANFWFAASLALYWCAALWIALDVGYFWGDALSRTQGALSALYSRNP TLSAIGYVFTPLTTVVQIPLVALSPWVPEFTRAGLAGALVSSVFMAASVRQLWLIASERNIRYWLAVVGLLLYALNPMII LYGATGMSEAPFIYATLWAVRRLIRWTSTDDVHDLITCGFALALAFLARYDALIMAFVAMWTVGFMTWRARYRRGFRDRI GFALVDMLLLVWPIGFAFVAWTGASWLTTGELFAQFTSTDGNAAIIAASGGGATGPQALFDASVRTFLISPALLLVAVVA VFFAYRRRDPEPIIPLALIGSVVFFQIITYSLGSTFGLLRFFLTALPLTIILLFQIIPPRHRFPSLRPGACYRDRVTGKY APKKITGVLVLAIFGGTGITLYGMSSANWAPQEYAIQELVFNMESPSQDAVHTLNTFSTEMDVADFVDSLNLGDGEVLLS TTYGFAVLTASNNQKQFIIPSDEDFITTLNEPAEHGVKYILALPREGRGATDPINLRYPDMYETGSHIATMEIEFINQGQ GQPNWRLYRVLTTPEQS
Sequences:
>Translated_577_residues MPIVKPMPALPRRAPVLASSQIEGFEHRRGWRRQANFWFAASLALYWCAALWIALDVGYFWGDALSRTQGALSALYSRNP TLSAIGYVFTPLTTVVQIPLVALSPWVPEFTRAGLAGALVSSVFMAASVRQLWLIASERNIRYWLAVVGLLLYALNPMII LYGATGMSEAPFIYATLWAVRRLIRWTSTDDVHDLITCGFALALAFLARYDALIMAFVAMWTVGFMTWRARYRRGFRDRI GFALVDMLLLVWPIGFAFVAWTGASWLTTGELFAQFTSTDGNAAIIAASGGGATGPQALFDASVRTFLISPALLLVAVVA VFFAYRRRDPEPIIPLALIGSVVFFQIITYSLGSTFGLLRFFLTALPLTIILLFQIIPPRHRFPSLRPGACYRDRVTGKY APKKITGVLVLAIFGGTGITLYGMSSANWAPQEYAIQELVFNMESPSQDAVHTLNTFSTEMDVADFVDSLNLGDGEVLLS TTYGFAVLTASNNQKQFIIPSDEDFITTLNEPAEHGVKYILALPREGRGATDPINLRYPDMYETGSHIATMEIEFINQGQ GQPNWRLYRVLTTPEQS >Mature_576_residues PIVKPMPALPRRAPVLASSQIEGFEHRRGWRRQANFWFAASLALYWCAALWIALDVGYFWGDALSRTQGALSALYSRNPT LSAIGYVFTPLTTVVQIPLVALSPWVPEFTRAGLAGALVSSVFMAASVRQLWLIASERNIRYWLAVVGLLLYALNPMIIL YGATGMSEAPFIYATLWAVRRLIRWTSTDDVHDLITCGFALALAFLARYDALIMAFVAMWTVGFMTWRARYRRGFRDRIG FALVDMLLLVWPIGFAFVAWTGASWLTTGELFAQFTSTDGNAAIIAASGGGATGPQALFDASVRTFLISPALLLVAVVAV FFAYRRRDPEPIIPLALIGSVVFFQIITYSLGSTFGLLRFFLTALPLTIILLFQIIPPRHRFPSLRPGACYRDRVTGKYA PKKITGVLVLAIFGGTGITLYGMSSANWAPQEYAIQELVFNMESPSQDAVHTLNTFSTEMDVADFVDSLNLGDGEVLLST TYGFAVLTASNNQKQFIIPSDEDFITTLNEPAEHGVKYILALPREGRGATDPINLRYPDMYETGSHIATMEIEFINQGQG QPNWRLYRVLTTPEQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63935; Mature: 63804
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVKPMPALPRRAPVLASSQIEGFEHRRGWRRQANFWFAASLALYWCAALWIALDVGYF CCCCCCCCCCCCCCCCCCCHHCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WGDALSRTQGALSALYSRNPTLSAIGYVFTPLTTVVQIPLVALSPWVPEFTRAGLAGALV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SSVFMAASVRQLWLIASERNIRYWLAVVGLLLYALNPMIILYGATGMSEAPFIYATLWAV HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH RRLIRWTSTDDVHDLITCGFALALAFLARYDALIMAFVAMWTVGFMTWRARYRRGFRDRI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GFALVDMLLLVWPIGFAFVAWTGASWLTTGELFAQFTSTDGNAAIIAASGGGATGPQALF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH DASVRTFLISPALLLVAVVAVFFAYRRRDPEPIIPLALIGSVVFFQIITYSLGSTFGLLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFLTALPLTIILLFQIIPPRHRFPSLRPGACYRDRVTGKYAPKKITGVLVLAIFGGTGIT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHEEEEEEECCCCEE LYGMSSANWAPQEYAIQELVFNMESPSQDAVHTLNTFSTEMDVADFVDSLNLGDGEVLLS EEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEE TTYGFAVLTASNNQKQFIIPSDEDFITTLNEPAEHGVKYILALPREGRGATDPINLRYPD EECCEEEEEECCCCCEEEECCCCCHHHHCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC MYETGSHIATMEIEFINQGQGQPNWRLYRVLTTPEQS CCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure PIVKPMPALPRRAPVLASSQIEGFEHRRGWRRQANFWFAASLALYWCAALWIALDVGYF CCCCCCCCCCCCCCCCCCHHCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WGDALSRTQGALSALYSRNPTLSAIGYVFTPLTTVVQIPLVALSPWVPEFTRAGLAGALV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SSVFMAASVRQLWLIASERNIRYWLAVVGLLLYALNPMIILYGATGMSEAPFIYATLWAV HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHH RRLIRWTSTDDVHDLITCGFALALAFLARYDALIMAFVAMWTVGFMTWRARYRRGFRDRI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GFALVDMLLLVWPIGFAFVAWTGASWLTTGELFAQFTSTDGNAAIIAASGGGATGPQALF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH DASVRTFLISPALLLVAVVAVFFAYRRRDPEPIIPLALIGSVVFFQIITYSLGSTFGLLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FFLTALPLTIILLFQIIPPRHRFPSLRPGACYRDRVTGKYAPKKITGVLVLAIFGGTGIT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHEEEEEEECCCCEE LYGMSSANWAPQEYAIQELVFNMESPSQDAVHTLNTFSTEMDVADFVDSLNLGDGEVLLS EEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEE TTYGFAVLTASNNQKQFIIPSDEDFITTLNEPAEHGVKYILALPREGRGATDPINLRYPD EECCEEEEEECCCCCEEEECCCCCHHHHCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC MYETGSHIATMEIEFINQGQGQPNWRLYRVLTTPEQS CCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA