Click here to switch to the map view.

The map label for this gene is 145294190

Identifier: 145294190

GI number: 145294190

Start: 164347

End: 165420

Strand: Direct

Name: 145294190

Synonym: cgR_0147

Alternate gene names: NA

Gene position: 164347-165420 (Clockwise)

Preceding gene: 145294189

Following gene: 145294191

Centisome position: 4.96

GC content: 64.06

Gene sequence:

>1074_bases
ATGTACTTTCCACCGGACGGTGCAGTAGACTTCATGGCTGTGAGCAGCACACATGAACGCAGGTACGGTCGGGCCCCGCA
GAAGAAGGGCTGGCGGACCTTCCTCCGGCCCGGCTGGGTGTTCGGTGTCCTTGCCATCATCGCTTTCTCCTACGTCGCCT
TTACCTTTCTGGCGCCGTGGCAGCTGAGCAGGGATAGCACTATCGTCGAGCGCAACGAGCAGATCGAAGCCGCCTTCGAG
GTCGAGCTCGTCCCCGCCGAGGAGATCTTTGACGCCCAGGGCAGTATCGAGCCCGGGAAGGAATGGGCCCGGGTGATCCT
TCAGGGCCACTACCTGCCCGAGGATGAGGTGCTGATGCGCAACCGTCCGGTCGACTCCTCCCCTGCCTTCCATGCCTTGA
CTCCCTTCCAGCTGAACTCCGGTGAGATCATCCTGGTCAACCGGGGTTTCAACCCGCCGCTTGAGGGCGGTGTCCCACCG
ATGGATACTGCGCCAGCCGGTGAGCAGTCCATCGTCGGCCACGCCCGATTCACCGAGCAGACACCGATGTCCCCCCCGAT
CGAGGACCAGGGCTACCGCCAGGTCTACGGCATCAACACCGCGCAGATTTCCGAGGTGATCGGCATGGACCTGGCGGAGG
ACTATGTGCAGCTGGCCGAGGGGCAGGCCGGGGAGATCAACGCCATCCCGGTGCCCATGCTCGACCGCGGTTCGCACCTG
TCTTACGCCTTCCAGTGGATCGCCTTCGGCATCATGGCCCCGCTCGGCCTGGGGTATTTTATCTGGGCGGAGCTGAAGGA
ACGCCGCCGTGTGCGCCGCGAGGAGGCCGAGCTGGCCGACGGATCCGCATCCTCGCAGCAGACCGGGGACTCTCAGGACG
AAGAGACAGATTCCGACCCGGTGGGCGCCCTCCGCACCATTCACCCGGAAAATGACACCCAGGGTCTCGCCCATGCCCAA
GCCACTACTTCCGCATCCTCTGGTGCCCGTGCACGCATGTTGCACGACCGTTACGGCGACAGCCAGCCGAACCACTCCCG
GAAATTCACCAACCGCCGGCACGAGCGGTTCTAA

Upstream 100 bases:

>100_bases
ACCTGAAGCCCGTCGAGGCGACCACGGTCACCGCCGACGAGGATGCGTACGGAAGGTCCCGGGTCTCGTAGTGCTTTCCC
CATGAGCACCCTGCGACAGG

Downstream 100 bases:

>100_bases
GCGCAGCCTTGCGCACCACACGTTGCGGCCCGCTCGATGTCTATACGGAGGGTGCGGAATGGGATACCCTCAAGGATTTT
TAATAAGCTTTCAATAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MYFPPDGAVDFMAVSSTHERRYGRAPQKKGWRTFLRPGWVFGVLAIIAFSYVAFTFLAPWQLSRDSTIVERNEQIEAAFE
VELVPAEEIFDAQGSIEPGKEWARVILQGHYLPEDEVLMRNRPVDSSPAFHALTPFQLNSGEIILVNRGFNPPLEGGVPP
MDTAPAGEQSIVGHARFTEQTPMSPPIEDQGYRQVYGINTAQISEVIGMDLAEDYVQLAEGQAGEINAIPVPMLDRGSHL
SYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEAELADGSASSQQTGDSQDEETDSDPVGALRTIHPENDTQGLAHAQ
ATTSASSGARARMLHDRYGDSQPNHSRKFTNRRHERF

Sequences:

>Translated_357_residues
MYFPPDGAVDFMAVSSTHERRYGRAPQKKGWRTFLRPGWVFGVLAIIAFSYVAFTFLAPWQLSRDSTIVERNEQIEAAFE
VELVPAEEIFDAQGSIEPGKEWARVILQGHYLPEDEVLMRNRPVDSSPAFHALTPFQLNSGEIILVNRGFNPPLEGGVPP
MDTAPAGEQSIVGHARFTEQTPMSPPIEDQGYRQVYGINTAQISEVIGMDLAEDYVQLAEGQAGEINAIPVPMLDRGSHL
SYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEAELADGSASSQQTGDSQDEETDSDPVGALRTIHPENDTQGLAHAQ
ATTSASSGARARMLHDRYGDSQPNHSRKFTNRRHERF
>Mature_357_residues
MYFPPDGAVDFMAVSSTHERRYGRAPQKKGWRTFLRPGWVFGVLAIIAFSYVAFTFLAPWQLSRDSTIVERNEQIEAAFE
VELVPAEEIFDAQGSIEPGKEWARVILQGHYLPEDEVLMRNRPVDSSPAFHALTPFQLNSGEIILVNRGFNPPLEGGVPP
MDTAPAGEQSIVGHARFTEQTPMSPPIEDQGYRQVYGINTAQISEVIGMDLAEDYVQLAEGQAGEINAIPVPMLDRGSHL
SYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEAELADGSASSQQTGDSQDEETDSDPVGALRTIHPENDTQGLAHAQ
ATTSASSGARARMLHDRYGDSQPNHSRKFTNRRHERF

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 39788; Mature: 39788

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFPPDGAVDFMAVSSTHERRYGRAPQKKGWRTFLRPGWVFGVLAIIAFSYVAFTFLAPW
CCCCCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
QLSRDSTIVERNEQIEAAFEVELVPAEEIFDAQGSIEPGKEWARVILQGHYLPEDEVLMR
CCCCCCHHHHCCCCEEEEEEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRPVDSSPAFHALTPFQLNSGEIILVNRGFNPPLEGGVPPMDTAPAGEQSIVGHARFTEQ
CCCCCCCCCEEEECCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCC
TPMSPPIEDQGYRQVYGINTAQISEVIGMDLAEDYVQLAEGQAGEINAIPVPMLDRGSHL
CCCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
SYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEAELADGSASSQQTGDSQDEETDSDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
VGALRTIHPENDTQGLAHAQATTSASSGARARMLHDRYGDSQPNHSRKFTNRRHERF
CCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYFPPDGAVDFMAVSSTHERRYGRAPQKKGWRTFLRPGWVFGVLAIIAFSYVAFTFLAPW
CCCCCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
QLSRDSTIVERNEQIEAAFEVELVPAEEIFDAQGSIEPGKEWARVILQGHYLPEDEVLMR
CCCCCCHHHHCCCCEEEEEEEEEECHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRPVDSSPAFHALTPFQLNSGEIILVNRGFNPPLEGGVPPMDTAPAGEQSIVGHARFTEQ
CCCCCCCCCEEEECCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCC
TPMSPPIEDQGYRQVYGINTAQISEVIGMDLAEDYVQLAEGQAGEINAIPVPMLDRGSHL
CCCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
SYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEAELADGSASSQQTGDSQDEETDSDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
VGALRTIHPENDTQGLAHAQATTSASSGARARMLHDRYGDSQPNHSRKFTNRRHERF
CCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]