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The map label for this gene is cmtR [H]

Identifier: 145294188

GI number: 145294188

Start: 161985

End: 162350

Strand: Direct

Name: cmtR [H]

Synonym: cgR_0145

Alternate gene names: 145294188

Gene position: 161985-162350 (Clockwise)

Preceding gene: 145294187

Following gene: 145294189

Centisome position: 4.89

GC content: 63.11

Gene sequence:

>366_bases
ATGCTGACTATTGCTTCTCGTCTTGATGTGATGAATCGCCTGGGCCGTGCCATGGCCGATCCCACCCGGTCCCGGATCCT
GTTGTCCCTACTCGAATCCCCCGGGTATCCGGCCCAACTGGCCGAAACGCTGGGGTTGACCCGGACGAATGTCTCCAACC
ACCTGGCCTGTCTACGCGACTGCGGGATTGTAGTCGCCGAGCCGGAGGGGCGGCGTACCCGCTATGAGATCGTCGACGCA
CACCTGGCCCGCGCGCTCAATGCCCTGGTAGAGATCACCCTCGCCGTTGATGAGGATGCCCCCTGCCTAGACCCTGCCTG
TCCGGTCGCCGGCTGTTGCGATACAGAAGGAGGCCAGCAGTCATGA

Upstream 100 bases:

>100_bases
TTTCAGGACCCCACCTCCCACCTGACGTTCGTCGGACATCCAGGGGCGACCACCCTAGGGACAATTGCAGACTAATCAGT
CCCCACTGTATAGTCAGTGC

Downstream 100 bases:

>100_bases
CGTCTGCCTGTGGTTGTGAACCATCTGCACCGATGGCCAGAGAAGAGGAGCACACGCCCTGGTGGCGTGATCGGGCTATC
CTCCTTCCTGTGGCCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRDCGIVVAEPEGRRTRYEIVDA
HLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQS

Sequences:

>Translated_121_residues
MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRDCGIVVAEPEGRRTRYEIVDA
HLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQS
>Mature_121_residues
MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRDCGIVVAEPEGRRTRYEIVDA
HLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQS

Specific function: Metal-responsive transcriptional repressor for the cmt operon. Binding of cadmium or lead causes the repressor to dissociate from the DNA [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12960; Mature: 12960

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRD
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH
CGIVVAEPEGRRTRYEIVDAHLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQ
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure
MLTIASRLDVMNRLGRAMADPTRSRILLSLLESPGYPAQLAETLGLTRTNVSNHLACLRD
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHH
CGIVVAEPEGRRTRYEIVDAHLARALNALVEITLAVDEDAPCLDPACPVAGCCDTEGGQQ
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]