Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294170
Identifier: 145294170
GI number: 145294170
Start: 148597
End: 149076
Strand: Direct
Name: 145294170
Synonym: cgR_0128
Alternate gene names: NA
Gene position: 148597-149076 (Clockwise)
Preceding gene: 145294168
Following gene: 145294172
Centisome position: 4.48
GC content: 58.54
Gene sequence:
>480_bases ATGAGACCTATATCCGGGTCGGCGGCAGGTGGTGCTACCTCTGATCTGGCGATCACCGCCGGTGGGCATACCCTGGACTT TTATCTCTCTCCGAAGCGGAACGTGGCCGCAGCGAAGCGTTTCCTGGCCAAGGCCCTCAGATCCAATGCGTCAGCCGGGT TCCCGCGGGTGATCAACACCGATAAAGCACCCTCCCTAGCCAGGGCAATCGCCGAGTTGAAGTCAGAGGGAATCTGCCCT CAGACGGTGGAACACCGGCAGGTGAAATACCTCAACAACATCCTGGAAGGCGACCATGGTCGGCTGAAACGGATCCTCGG GCCGAAAGGCGCGTTTAAGAACTTAGACATCTGCATATCGGACGTTGAAAGGGAAGGAGGCGATGCACTCATTGCGGAAA GGGCAAGGCACGATGTTTGCCCTCACGGGCAACCGAACCCGGACGCGGTGATCGTCAACCAGGTCTTCGAGACGGCCTAA
Upstream 100 bases:
>100_bases ATTCTCACCGCTGGGTCCAGAAATATGCCCCTGAGCTGGACAAGCACACTCGGTGGTACCGGCAGGTACCTGATTGGCAG GCTAAGTTCCTGGCGGGTGG
Downstream 100 bases:
>100_bases CAACGCCCACACACAGCGGCCATCAGGGAATGAGAAACTGAGTCTTCGCTGCTCTCCGCCCAACTTTGCAACAGCACCGT CACAGTGCAGCTACATGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS6 Family; Transposase A; Transposase For Insertion Sequence; Transposase For Insertion Sequence IS; Integrase Catalytic Region; Transposase Protein Fragment TnpNC
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MRPISGSAAGGATSDLAITAGGHTLDFYLSPKRNVAAAKRFLAKALRSNASAGFPRVINTDKAPSLARAIAELKSEGICP QTVEHRQVKYLNNILEGDHGRLKRILGPKGAFKNLDICISDVEREGGDALIAERARHDVCPHGQPNPDAVIVNQVFETA
Sequences:
>Translated_159_residues MRPISGSAAGGATSDLAITAGGHTLDFYLSPKRNVAAAKRFLAKALRSNASAGFPRVINTDKAPSLARAIAELKSEGICP QTVEHRQVKYLNNILEGDHGRLKRILGPKGAFKNLDICISDVEREGGDALIAERARHDVCPHGQPNPDAVIVNQVFETA >Mature_159_residues MRPISGSAAGGATSDLAITAGGHTLDFYLSPKRNVAAAKRFLAKALRSNASAGFPRVINTDKAPSLARAIAELKSEGICP QTVEHRQVKYLNNILEGDHGRLKRILGPKGAFKNLDICISDVEREGGDALIAERARHDVCPHGQPNPDAVIVNQVFETA
Specific function: Unknown
COG id: COG3316
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16963; Mature: 16963
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPISGSAAGGATSDLAITAGGHTLDFYLSPKRNVAAAKRFLAKALRSNASAGFPRVINT CCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC DKAPSLARAIAELKSEGICPQTVEHRQVKYLNNILEGDHGRLKRILGPKGAFKNLDICIS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH DVEREGGDALIAERARHDVCPHGQPNPDAVIVNQVFETA HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCC >Mature Secondary Structure MRPISGSAAGGATSDLAITAGGHTLDFYLSPKRNVAAAKRFLAKALRSNASAGFPRVINT CCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC DKAPSLARAIAELKSEGICPQTVEHRQVKYLNNILEGDHGRLKRILGPKGAFKNLDICIS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH DVEREGGDALIAERARHDVCPHGQPNPDAVIVNQVFETA HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA