Click here to switch to the map view.

The map label for this gene is truncated-res [H]

Identifier: 14141853

GI number: 14141853

Start: 20260

End: 20598

Strand: Reverse

Name: truncated-res [H]

Synonym: SAVP030

Alternate gene names: 14141853

Gene position: 20598-20260 (Counterclockwise)

Preceding gene: 14141854

Following gene: 14141852

Centisome position: 82.04

GC content: 35.4

Gene sequence:

>339_bases
ATGGCTAAAATTGGTTATGCACGTGTGTCAACACAAGATCAAAGTCTTGATGGACAGATTGATACACTTGAGGAATATGG
TTGTGAACGTATCTTTAGCGAGAAAGCGAGTGGTCGTAAAACTAAAAGAACGGAACTTGATAAGTGTTTAGATTATTTAC
GTGAAGGAGATATTCTAGTTGTCTATAAATTAGATCGTCTTGGACGTACAACAAAACAATTAATTGAGCTATCTCAATGG
TTGGATGAAAATAGCATTGATTTACATATTATAGATATGAATGTGTCAACGAAAGATGCGATGGGCAAGATGTTCTTTAC
GGTTCTGTTGCAAAGTTGA

Upstream 100 bases:

>100_bases
AATCATGAGTTTTTAGATGCTGACAGACGTGTTTATTTACATCGAGAACTATATTTCATTAGTAAGTACCCATAAAACGA
TTAAAAAAGGTGGTGTTCAA

Downstream 100 bases:

>100_bases
ATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAAGATGTTATCA
CTGTAGCCGTTGGCTACTAT

Product: truncated resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQW
LDENSIDLHIIDMNVSTKDAMGKMFFTVLLQS

Sequences:

>Translated_112_residues
MAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQW
LDENSIDLHIIDMNVSTKDAMGKMFFTVLLQS
>Mature_111_residues
AKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILVVYKLDRLGRTTKQLIELSQWL
DENSIDLHIIDMNVSTKDAMGKMFFTVLLQS

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=106, Percent_Identity=46.2264150943396, Blast_Score=93, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 12884; Mature: 12753

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILV
CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEE
VYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDAMGKMFFTVLLQS
EEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCLDYLREGDILV
CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEE
VYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDAMGKMFFTVLLQS
EEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2997130 [H]