Click here to switch to the map view.

The map label for this gene is tcaA [H]

Identifier: 14141842

GI number: 14141842

Start: 12699

End: 13535

Strand: Reverse

Name: tcaA [H]

Synonym: SAVP019

Alternate gene names: 14141842

Gene position: 13535-12699 (Counterclockwise)

Preceding gene: 14141843

Following gene: 14141840

Centisome position: 53.91

GC content: 24.37

Gene sequence:

>837_bases
GTGAAAGAATTTAATAACACTGGAATTTACAAATATCAGCAAGAAAATGCTAAAAAGGTAATAGCAGAAAGCAATCAAAC
AACAGAATTAGGCAAGTTCTTTATTGGTAAATATAGTATTAAAACAGATAAAACAATTGAAGATTCAATTCACAATGGGA
CTTTGACAGGAAAAATAGATATAGATTTAAGCAATAGAGGAAACAATAATAAGATATATGCAGATGAAGATTTTAACCAA
AGCTGGTTTAAGGTTAAGCTAAACAATGATAGTTTATTAGAAAAAAATAGTTACAAACTTTTAATTGATGATAAAGATGT
TGATTATAATTCCAAAAAGACATATGGAAAGTATTACAATCCAACTGAATTAAGTGTATATGCGATTGGAAAATTAGAGG
GTAAAGAGTTTAAAACTAACAGAATAAATATAAGACGTAATTATGATAATAAACCTCAAAATTTAAAATTAAGTTTTAAG
GAATCTCAAATAAGAGATTATGAGAGTAAAAGTAAAAAGGTTAAAGAAAAAGCTAAAAGCTATATTAAAGAATATACGAA
AGAGTTAAACAAAGCATATAAAAAGAAAGATTATAAATATATATCTGACTACGTTAAAAATAACTCTCAATTAGAAAAAC
AACTAAAAAAACAGGTTAAGTCTAAATCAAAAGTTAAATTTAAAGATGTTAAGATAAACAACGTTAAACGTGATAAAAAC
AAAATATATATTGAGTTAAGTAAAACCAACAATGGTAATGTGTTTCAAACGAAATATACCTTAGATTACGATAATGTATC
AAATGAATTTCTAGTAGAAGATTCACATGATAATTAA

Upstream 100 bases:

>100_bases
ACAGATCAATACGGAAATAACCTAATAACTATTAAGAAAAACGGAAAGACTTTCTTTTTTATAGATAAATTAGAATTCAA
ACCTACTTACCAGCGTTTAT

Downstream 100 bases:

>100_bases
AATAATTCAAACACCAATGACATTAAATTCATTGGTGTTTTTTACTGTACGCTAACAATACTACTTAAAGGTATTTTTAG
TTTATTGTTTGAATTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKIDIDLSNRGNNNKIYADEDFNQ
SWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYNPTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFK
ESQIRDYESKSKKVKEKAKSYIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKN
KIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN

Sequences:

>Translated_278_residues
MKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKIDIDLSNRGNNNKIYADEDFNQ
SWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYNPTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFK
ESQIRDYESKSKKVKEKAKSYIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKN
KIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN
>Mature_278_residues
MKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKIDIDLSNRGNNNKIYADEDFNQ
SWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYNPTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFK
ESQIRDYESKSKKVKEKAKSYIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKN
KIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN

Specific function: Unknown

COG id: COG4640

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tcaA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32824; Mature: 32824

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKID
CCCCCCCCCEEEEHHCHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHCCCCEEEEEEE
IDLSNRGNNNKIYADEDFNQSWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYN
EEECCCCCCCEEEECCCCCCCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCC
PTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFKESQIRDYESKSKKVKEKAKS
CCEEEEEEEEEECCCEEECEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
YIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKN
HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCEECCCC
KIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN
EEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCC
>Mature Secondary Structure
MKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKID
CCCCCCCCCEEEEHHCHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHCCCCEEEEEEE
IDLSNRGNNNKIYADEDFNQSWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYN
EEECCCCCCCEEEECCCCCCCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCC
PTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFKESQIRDYESKSKKVKEKAKS
CCEEEEEEEEEECCCEEECEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
YIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKN
HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECCEECCCC
KIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN
EEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA