Definition | Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence. |
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Accession | NC_002774 |
Length | 25,107 |
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The map label for this gene is ydeJ [H]
Identifier: 14141829
GI number: 14141829
Start: 5177
End: 5881
Strand: Reverse
Name: ydeJ [H]
Synonym: SAVP006
Alternate gene names: 14141829
Gene position: 5881-5177 (Counterclockwise)
Preceding gene: 14141830
Following gene: 14141825
Centisome position: 23.42
GC content: 25.96
Gene sequence:
>705_bases ATGAAAAAAATCATTTTACCTATATTAATTGTTAGTTTATCGGTAATTTTAGTGAGTTGTAATAATAACGATTCAGAACA TCACAATGATAATAATTCTAGTGATACTAACACCTCAGAAAACAAAGATAATGAAGCATCAAATGAAATTGACGAAAAAA CTAACACATCTGATAGTGCGGATAATTCAGAAAGTAGTAATAAACAAAATAAAGAAAAAAATGATAATAAAAAACAAGAA AAAAATAATGATAGTAATAAGAAGCAACAATCTACTGATAAAAATAAAAGTTACTTAAATAATTTTAACTCGAAAGAAAT TGAATATGCACGAGTTTGGTATCAGTTAATATCTACAAGAAATGATTTAAAAGGTATTAAAAATGTTTATGTTACAGAAA TACCAAAAGGCTCAAAAGTAAATCCACAAGCCAAAAATAGTGCAATTTATAAAGAAAAAGTTGTGAAATTAGAAGCTCCT ATGAGAGCTGGTGGGTCTGTAACATATAGCAGTAATGGTGATGGAACAATTAATGTATATAATAATATCCCTTATAAATG GGAAAATTCACAAAATAGTGATTATAGTCAAATGAATAAGATAACAAAAAAAGCAATAGAGGAGAATATTGAAACAGTCT ATATTAAACCCTACGACAATAAAACAGTAGCTAAGTTAGCAAGTAAAATTAGATATAATAAGTAG
Upstream 100 bases:
>100_bases TATATATTTAATACATATTTTTCAACTCATGTAATTTACGTTTTCTTGCTGAAAAAATATTAACATAATCTAATTTGAAA TACTGAAAAGGAGTTGTAAT
Downstream 100 bases:
>100_bases TTAGTAGATTATTAAAAAGGCGCCTAAAATTAGGCGTCTTTTTTATCATTAGTTCAAAAGATAAGCATAACGTTCCATGT AACAGCATATAAAGTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
Sequences:
>Translated_234_residues MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK >Mature_234_residues MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26590; Mature: 26590
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSA CCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTR CCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVY HHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEC NNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSA CCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC DNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTR CCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH NDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVY HHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEC NNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]