Definition Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence.
Accession NC_002774
Length 25,107

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The map label for this gene is ydeJ [H]

Identifier: 14141829

GI number: 14141829

Start: 5177

End: 5881

Strand: Reverse

Name: ydeJ [H]

Synonym: SAVP006

Alternate gene names: 14141829

Gene position: 5881-5177 (Counterclockwise)

Preceding gene: 14141830

Following gene: 14141825

Centisome position: 23.42

GC content: 25.96

Gene sequence:

>705_bases
ATGAAAAAAATCATTTTACCTATATTAATTGTTAGTTTATCGGTAATTTTAGTGAGTTGTAATAATAACGATTCAGAACA
TCACAATGATAATAATTCTAGTGATACTAACACCTCAGAAAACAAAGATAATGAAGCATCAAATGAAATTGACGAAAAAA
CTAACACATCTGATAGTGCGGATAATTCAGAAAGTAGTAATAAACAAAATAAAGAAAAAAATGATAATAAAAAACAAGAA
AAAAATAATGATAGTAATAAGAAGCAACAATCTACTGATAAAAATAAAAGTTACTTAAATAATTTTAACTCGAAAGAAAT
TGAATATGCACGAGTTTGGTATCAGTTAATATCTACAAGAAATGATTTAAAAGGTATTAAAAATGTTTATGTTACAGAAA
TACCAAAAGGCTCAAAAGTAAATCCACAAGCCAAAAATAGTGCAATTTATAAAGAAAAAGTTGTGAAATTAGAAGCTCCT
ATGAGAGCTGGTGGGTCTGTAACATATAGCAGTAATGGTGATGGAACAATTAATGTATATAATAATATCCCTTATAAATG
GGAAAATTCACAAAATAGTGATTATAGTCAAATGAATAAGATAACAAAAAAAGCAATAGAGGAGAATATTGAAACAGTCT
ATATTAAACCCTACGACAATAAAACAGTAGCTAAGTTAGCAAGTAAAATTAGATATAATAAGTAG

Upstream 100 bases:

>100_bases
TATATATTTAATACATATTTTTCAACTCATGTAATTTACGTTTTCTTGCTGAAAAAATATTAACATAATCTAATTTGAAA
TACTGAAAAGGAGTTGTAAT

Downstream 100 bases:

>100_bases
TTAGTAGATTATTAAAAAGGCGCCTAAAATTAGGCGTCTTTTTTATCATTAGTTCAAAAGATAAGCATAACGTTCCATGT
AACAGCATATAAAGTAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE
KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP
MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK

Sequences:

>Translated_234_residues
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE
KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP
MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
>Mature_234_residues
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSADNSESSNKQNKEKNDNKKQE
KNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAP
MRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26590; Mature: 26590

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSA
CCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTR
CCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVY
HHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEC
NNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEIDEKTNTSDSA
CCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLNNFNSKEIEYARVWYQLISTR
CCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NDLKGIKNVYVTEIPKGSKVNPQAKNSAIYKEKVVKLEAPMRAGGSVTYSSNGDGTINVY
HHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEC
NNIPYKWENSQNSDYSQMNKITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]