Click here to switch to the map view.

The map label for this gene is ywfL [H]

Identifier: 138896989

GI number: 138896989

Start: 3467785

End: 3468645

Strand: Reverse

Name: ywfL [H]

Synonym: GTNG_3360

Alternate gene names: 138896989

Gene position: 3468645-3467785 (Counterclockwise)

Preceding gene: 138896990

Following gene: 138896987

Centisome position: 97.7

GC content: 52.73

Gene sequence:

>861_bases
ATGATGAACGAATTGTTGCAGCAACGAAAATGGCGAGTGATTGATCAATCGCATTTCGGCTCGTTATTTGACGCAAAACA
GTCGTTTGCGACTGATGATACGCTATGCACCGCGGTCGGTACCGGGCGGTCTGATGCCGTCGTCCGCACATGGGTGCATG
AGAATACCGTCGTTTTAGGCGCCGCGGATACAAAACTTCCGTATATTGATGAGGCCGTTGCGTTTTTGCGCCAGCGAGGG
TACCGTGTCGTCGTGCGTAATTCCGGTGGATTGGCTGTCGTTCTTGACAGCGGGGTGCTGAACATATCACTTATTTTTCC
AGAAACGAAAAAACACATGATTGCCATCGAACAGGGATATGAAGCGATGTACGCGCTCATTGCAGCCATGCTTGCCCCCT
ACGGCGCCAACATCGAAGCGGGAGAAGTTGTTGGCTCGTACTGCCCAGGCAGCTATGACTTAAGCATCGGCGGGAAAAAA
TTCGCTGGCATTTCACAGCGGCGCGTGCGCGGTGGAGTCGCGGTACAAATTTATCTTTGCGTCACCGGCAGCGGAGCTGA
ACGAGCTGAGCTCATCCGCTGCTTTTACGAGCTCGGTCGGCAAGGGAAAGAAACGAAATTTACCTATCCTGATGTCGTCC
CAGGAGTGATGGCATCACTTTCTGAACTCATCGGCCGCGAGTTGTCGGTTGACGAGCTGTTGGTTGCCCTTTGGCGCACG
CTTCAATCGTTTGGCGGTGCTTTGTATTCGTCCGCCCTCGATGGTGAGGAATGGGAATGGTATGAACAATATTGGGCACG
CATCGTCGAACGGAACGCCAACGTATCCATCACAGAACCGAGTGAAGGCATCAAACGGTAA

Upstream 100 bases:

>100_bases
CGTTATGCCGCAGTGAACGGGGACGAGATAAGAGGCATCCGCTTTGGTTATGTTATAATCATAATCAAAAAACGGATGAA
GAATAAGGAGCTAGCAGCTA

Downstream 100 bases:

>100_bases
CATTCATTTTGCTTCGGATGAATGAGGCCGACTTGCCAGCTATCGAGAAGATCGCCGTTTTCCGACGAAAGAAAAGGATG
CCGCAGTTCTCCATCGGCAT

Product: lipoate-protein ligase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MMNELLQQRKWRVIDQSHFGSLFDAKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLGAADTKLPYIDEAVAFLRQRG
YRVVVRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGYEAMYALIAAMLAPYGANIEAGEVVGSYCPGSYDLSIGGKK
FAGISQRRVRGGVAVQIYLCVTGSGAERAELIRCFYELGRQGKETKFTYPDVVPGVMASLSELIGRELSVDELLVALWRT
LQSFGGALYSSALDGEEWEWYEQYWARIVERNANVSITEPSEGIKR

Sequences:

>Translated_286_residues
MMNELLQQRKWRVIDQSHFGSLFDAKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLGAADTKLPYIDEAVAFLRQRG
YRVVVRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGYEAMYALIAAMLAPYGANIEAGEVVGSYCPGSYDLSIGGKK
FAGISQRRVRGGVAVQIYLCVTGSGAERAELIRCFYELGRQGKETKFTYPDVVPGVMASLSELIGRELSVDELLVALWRT
LQSFGGALYSSALDGEEWEWYEQYWARIVERNANVSITEPSEGIKR
>Mature_286_residues
MMNELLQQRKWRVIDQSHFGSLFDAKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLGAADTKLPYIDEAVAFLRQRG
YRVVVRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGYEAMYALIAAMLAPYGANIEAGEVVGSYCPGSYDLSIGGKK
FAGISQRRVRGGVAVQIYLCVTGSGAERAELIRCFYELGRQGKETKFTYPDVVPGVMASLSELIGRELSVDELLVALWRT
LQSFGGALYSSALDGEEWEWYEQYWARIVERNANVSITEPSEGIKR

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 31553; Mature: 31553

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNELLQQRKWRVIDQSHFGSLFDAKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLG
CHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCHHEEEECCCCCCCEEEEEECCCEEEEE
AADTKLPYIDEAVAFLRQRGYRVVVRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGY
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCEEEHHHHH
EAMYALIAAMLAPYGANIEAGEVVGSYCPGSYDLSIGGKKFAGISQRRVRGGVAVQIYLC
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEECCCCCHHCCCHHHHHCCCEEEEEEEE
VTGSGAERAELIRCFYELGRQGKETKFTYPDVVPGVMASLSELIGRELSVDELLVALWRT
EECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LQSFGGALYSSALDGEEWEWYEQYWARIVERNANVSITEPSEGIKR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCC
>Mature Secondary Structure
MMNELLQQRKWRVIDQSHFGSLFDAKQSFATDDTLCTAVGTGRSDAVVRTWVHENTVVLG
CHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCHHEEEECCCCCCCEEEEEECCCEEEEE
AADTKLPYIDEAVAFLRQRGYRVVVRNSGGLAVVLDSGVLNISLIFPETKKHMIAIEQGY
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCEEEHHHHH
EAMYALIAAMLAPYGANIEAGEVVGSYCPGSYDLSIGGKKFAGISQRRVRGGVAVQIYLC
HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEECCCCCHHCCCHHHHHCCCEEEEEEEE
VTGSGAERAELIRCFYELGRQGKETKFTYPDVVPGVMASLSELIGRELSVDELLVALWRT
EECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LQSFGGALYSSALDGEEWEWYEQYWARIVERNANVSITEPSEGIKR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]