Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 138896970

GI number: 138896970

Start: 3446862

End: 3448004

Strand: Reverse

Name: mmgC [H]

Synonym: GTNG_3339

Alternate gene names: 138896970

Gene position: 3448004-3446862 (Counterclockwise)

Preceding gene: 138896971

Following gene: 138896969

Centisome position: 97.12

GC content: 53.28

Gene sequence:

>1143_bases
GTGCAATTTCGGTTTACGGAAGAACAAGAAATGATGCGGCAAATGGTGCGCGAATTTGCAGCAGCGGAAATCGCTCCGTT
TGTTGAGCGCATGGAGCAAGGAGAATTTCCGCGCCCGATTTTAGCTAAAATGGCCGAGCTCGGCTTAATGGGGATCACTG
TTCCGGAACAGTACGGCGGCGCAGGCATGGACTTTCTTTCGTACATTATCGCTATCCATGAAATTTCGAAAGTGAGCCCG
ACGGTCGGTGTCATTTTATCGGTGCACACGTCCGTCGGCACGAACCCGATTTTGTATTTCGGCACGGAAGAACAGAAACA
AAAATATGTGACGAAACTCGCTCGCGGTGAGTATTTAGGGGCGTTTTGCCTCACCGAACCGAGTGCTGGCTCGGATGCGA
AAAGCTTGAAGACAAAAGCGGTGCGTCGCGGCGATACGTATGTGTTGAACGGCTCAAAAATTTTCATCACCAACGGTGGA
GAAGCGGACACGTACATCGTGTTTGCCCGCACGAATCCGGAGGAAACCGGCAGCCGCGGCATTTCCGCGTTTATCGTTGA
AAAAGGGACGCCGGGGATGGAGATCGGCAAAGATGAAAAGAAAATGGGGTTGCACGGATCGCGGACGGTGACAATCACGT
TTGACGACGCTGAGGTGCCAGCGGAAAACTTGCTCGGCCAAGAAGGGGAAGGATTTAAAATTGCTATGGCCAACCTTGAT
GTCGGCCGGATCGGCATCGCTGCCCAAGCGCTTGGCATTGCGGAAGCAGCGGTCGAACATGCTGTGGCCTATGCCAAAGA
ACGGGTGCAGTTTGGCAAACCAATTGCCGAGCAGCAAGGCGTGGCCTTTAAGCTTGCTGATATGGCAACGGCGGCGGAAG
CGGCGAAATGGCTCGTCTACCGCGCCGCTTGGTTGCGCGCTCAAGGCTTGCCGTGCGGCAAAGAAGCGTCGATGGCCAAA
CTGTTTGCCTCGCAAACGGCGATGGATAATGCCATCGAAGCCGTGCAAATTTTTGGCGGCAACGGTTATACGAAAGATTA
TCCGGTCGAGCGGCTGTTCCGCGATGCGAAAATTACGCAAATTTACGAAGGGACGAGCGAAATCCAGCGGATTGTCATTA
GCAAGCAACTGACCAAACAGTAA

Upstream 100 bases:

>100_bases
GGCTGGTTGGCTTGGTCGCAAGACGGGGCGCGGATTTTACACGTACGAGTAAGTAGATAGAGGCAACATTGACAAACAAC
ATGAAAAAGGGGGATGTCCC

Downstream 100 bases:

>100_bases
TCAAAACAAGGGGAAGAGGATTTTTTATAGAAAACGGGGGAATGAAGCGATGAATTTTCAATTGAGCGAAGAACATGAAA
TGTTGCGGAAAATGGTGCGT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQFRFTEEQEMMRQMVREFAAAEIAPFVERMEQGEFPRPILAKMAELGLMGITVPEQYGGAGMDFLSYIIAIHEISKVSP
TVGVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEYLGAFCLTEPSAGSDAKSLKTKAVRRGDTYVLNGSKIFITNGG
EADTYIVFARTNPEETGSRGISAFIVEKGTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPAENLLGQEGEGFKIAMANLD
VGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVYRAAWLRAQGLPCGKEASMAK
LFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKITQIYEGTSEIQRIVISKQLTKQ

Sequences:

>Translated_380_residues
MQFRFTEEQEMMRQMVREFAAAEIAPFVERMEQGEFPRPILAKMAELGLMGITVPEQYGGAGMDFLSYIIAIHEISKVSP
TVGVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEYLGAFCLTEPSAGSDAKSLKTKAVRRGDTYVLNGSKIFITNGG
EADTYIVFARTNPEETGSRGISAFIVEKGTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPAENLLGQEGEGFKIAMANLD
VGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVYRAAWLRAQGLPCGKEASMAK
LFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKITQIYEGTSEIQRIVISKQLTKQ
>Mature_380_residues
MQFRFTEEQEMMRQMVREFAAAEIAPFVERMEQGEFPRPILAKMAELGLMGITVPEQYGGAGMDFLSYIIAIHEISKVSP
TVGVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEYLGAFCLTEPSAGSDAKSLKTKAVRRGDTYVLNGSKIFITNGG
EADTYIVFARTNPEETGSRGISAFIVEKGTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPAENLLGQEGEGFKIAMANLD
VGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVYRAAWLRAQGLPCGKEASMAK
LFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKITQIYEGTSEIQRIVISKQLTKQ

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=48.4042553191489, Blast_Score=359, Evalue=3e-99,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=45.1871657754011, Blast_Score=327, Evalue=2e-89,
Organism=Homo sapiens, GI4557231, Length=378, Percent_Identity=42.3280423280423, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI187960098, Length=378, Percent_Identity=42.3280423280423, Blast_Score=302, Evalue=3e-82,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=39.7333333333333, Blast_Score=300, Evalue=1e-81,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=41.3173652694611, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=40.4761904761905, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI21361497, Length=350, Percent_Identity=42.2857142857143, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI4557235, Length=345, Percent_Identity=41.7391304347826, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI76496475, Length=345, Percent_Identity=41.7391304347826, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=35.6382978723404, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI4503943, Length=382, Percent_Identity=34.0314136125654, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI7669494, Length=367, Percent_Identity=34.3324250681199, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI48976061, Length=335, Percent_Identity=30.4477611940298, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI211971008, Length=335, Percent_Identity=30.4477611940298, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI38505218, Length=343, Percent_Identity=29.1545189504373, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI156104864, Length=428, Percent_Identity=25, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI156104866, Length=428, Percent_Identity=25, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI218563752, Length=245, Percent_Identity=27.7551020408163, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=385, Percent_Identity=33.2467532467532, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1786223, Length=384, Percent_Identity=31.25, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI87082384, Length=272, Percent_Identity=28.6764705882353, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081702, Length=395, Percent_Identity=25.8227848101266, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=44.0944881889764, Blast_Score=306, Evalue=9e-84,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=40.053050397878, Blast_Score=305, Evalue=3e-83,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=43.0446194225722, Blast_Score=302, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI17508101, Length=373, Percent_Identity=41.2868632707775, Blast_Score=301, Evalue=3e-82,
Organism=Caenorhabditis elegans, GI17538396, Length=381, Percent_Identity=37.7952755905512, Blast_Score=300, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=40.7894736842105, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17533517, Length=367, Percent_Identity=37.874659400545, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI71990804, Length=305, Percent_Identity=44.2622950819672, Blast_Score=250, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=37.7952755905512, Blast_Score=245, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI71985192, Length=306, Percent_Identity=39.8692810457516, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17534353, Length=379, Percent_Identity=33.509234828496, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=40, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=29.8153034300792, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71982178, Length=270, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=27.9683377308707, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=32.5, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17562446, Length=389, Percent_Identity=27.7634961439589, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17531913, Length=178, Percent_Identity=29.7752808988764, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=339, Percent_Identity=28.023598820059, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=339, Percent_Identity=28.9085545722714, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=48.2758620689655, Blast_Score=361, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24646207, Length=377, Percent_Identity=44.5623342175066, Blast_Score=332, Evalue=2e-91,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=43.0851063829787, Blast_Score=317, Evalue=6e-87,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=43.5356200527704, Blast_Score=313, Evalue=1e-85,
Organism=Drosophila melanogaster, GI21355753, Length=382, Percent_Identity=38.2198952879581, Blast_Score=275, Evalue=3e-74,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=39.9425287356322, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=33.6814621409922, Blast_Score=191, Evalue=9e-49,
Organism=Drosophila melanogaster, GI45550141, Length=310, Percent_Identity=27.741935483871, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221473076, Length=310, Percent_Identity=27.741935483871, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281365206, Length=237, Percent_Identity=26.1603375527426, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585193, Length=237, Percent_Identity=26.1603375527426, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585195, Length=237, Percent_Identity=26.1603375527426, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585191, Length=237, Percent_Identity=26.1603375527426, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41409; Mature: 41409

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFRFTEEQEMMRQMVREFAAAEIAPFVERMEQGEFPRPILAKMAELGLMGITVPEQYGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCHHCCC
AGMDFLSYIIAIHEISKVSPTVGVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEYLG
CCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEE
AFCLTEPSAGSDAKSLKTKAVRRGDTYVLNGSKIFITNGGEADTYIVFARTNPEETGSRG
EEEECCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCEEEEEEECCCHHCCCCC
ISAFIVEKGTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPAENLLGQEGEGFKIAMANLD
CEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCC
VGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHHHHHHHHH
RAAWLRAQGLPCGKEASMAKLFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKITQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHH
IYEGTSEIQRIVISKQLTKQ
HHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQFRFTEEQEMMRQMVREFAAAEIAPFVERMEQGEFPRPILAKMAELGLMGITVPEQYGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCHHCCC
AGMDFLSYIIAIHEISKVSPTVGVILSVHTSVGTNPILYFGTEEQKQKYVTKLARGEYLG
CCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCEE
AFCLTEPSAGSDAKSLKTKAVRRGDTYVLNGSKIFITNGGEADTYIVFARTNPEETGSRG
EEEECCCCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCEEEEEEECCCHHCCCCC
ISAFIVEKGTPGMEIGKDEKKMGLHGSRTVTITFDDAEVPAENLLGQEGEGFKIAMANLD
CEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCC
VGRIGIAAQALGIAEAAVEHAVAYAKERVQFGKPIAEQQGVAFKLADMATAAEAAKWLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHHHHHHHHH
RAAWLRAQGLPCGKEASMAKLFASQTAMDNAIEAVQIFGGNGYTKDYPVERLFRDAKITQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHH
IYEGTSEIQRIVISKQLTKQ
HHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]