Click here to switch to the map view.

The map label for this gene is ywmB [H]

Identifier: 138896921

GI number: 138896921

Start: 3399833

End: 3400588

Strand: Reverse

Name: ywmB [H]

Synonym: GTNG_3290

Alternate gene names: 138896921

Gene position: 3400588-3399833 (Counterclockwise)

Preceding gene: 138896922

Following gene: 138896920

Centisome position: 95.78

GC content: 46.3

Gene sequence:

>756_bases
ATGAGAAAAAAACGGATGAAATGGTTAATGGCGCTCGTGCTCACGAGCTTGTTTTTAGCCGCGTGGCAGTATCGGACGGA
AGGCGTGCGGGGAGACGAATGGTCGGTACCAATGGAAACGATGGCGCACACATTAACGAAACACGGTGCTTCGCTTGGTC
GATGGATCATTTACACAAGAGAGTATGCCCACGATATTCAAAATGATGCGGACTTTTTCAAAAAAATGGACGAGCTGAAA
CAAACGTATCGTTCGTTTCATTGGTCGTTTGAAAAAACGAGCCATGGGAAAAAAGCGATCGGCACAAACGAATCCCCCTT
CTTCCAAGAACAAATTCAGCTGGTAATGACCGTCGCAAATGGGACACCGCAAACGTATATCCTCTATGAAGCAACAGGCC
CAACATGGAGCCAAACTAGGTGGAAAGAAGCAGCACAACACATTCAAACAAAGACGAATGGATTATTTGTGAACAACCCC
ACATTTTATGCTTGTATTGAAGGCGAATTCAGTGATAATATGAAAGGTGGTTTACTCGAACAGGCTTCCCAATTGCTACG
AGACTTTCAAGCGACGCCTGTTGAGTGGCTGCGGGAAGAGTCATTCGTCTCCCTGTCTGCATATACTGGGCAGTGGAAGA
ACGTTCTCCCGGCGGCCAATCACCAAGACATCAATGTACAACTTGCTTTGAGAGAAAGATTGGGCGGCAAGACGCGTGTC
GTTGTTGGAACCCCAATCATTACCATTGAATATTAA

Upstream 100 bases:

>100_bases
TAAGAAAACGATTTCAAAGATAACCCGTTGTCGATTTTTTTGACGTATGTTCCCTTGTCTGGTGGCAACAATAACAAGTA
AGGAGAGGAAGGGAACGAAG

Downstream 100 bases:

>100_bases
TATAGAGAAATTGGACGCGGAGGGGAATATCTTGGAAAAGATCATCGTCCGTGGCGGAAACCGGTTGAGCGGCACCGTCA
AAGTGGAAGGCGCAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRKKRMKWLMALVLTSLFLAAWQYRTEGVRGDEWSVPMETMAHTLTKHGASLGRWIIYTREYAHDIQNDADFFKKMDELK
QTYRSFHWSFEKTSHGKKAIGTNESPFFQEQIQLVMTVANGTPQTYILYEATGPTWSQTRWKEAAQHIQTKTNGLFVNNP
TFYACIEGEFSDNMKGGLLEQASQLLRDFQATPVEWLREESFVSLSAYTGQWKNVLPAANHQDINVQLALRERLGGKTRV
VVGTPIITIEY

Sequences:

>Translated_251_residues
MRKKRMKWLMALVLTSLFLAAWQYRTEGVRGDEWSVPMETMAHTLTKHGASLGRWIIYTREYAHDIQNDADFFKKMDELK
QTYRSFHWSFEKTSHGKKAIGTNESPFFQEQIQLVMTVANGTPQTYILYEATGPTWSQTRWKEAAQHIQTKTNGLFVNNP
TFYACIEGEFSDNMKGGLLEQASQLLRDFQATPVEWLREESFVSLSAYTGQWKNVLPAANHQDINVQLALRERLGGKTRV
VVGTPIITIEY
>Mature_251_residues
MRKKRMKWLMALVLTSLFLAAWQYRTEGVRGDEWSVPMETMAHTLTKHGASLGRWIIYTREYAHDIQNDADFFKKMDELK
QTYRSFHWSFEKTSHGKKAIGTNESPFFQEQIQLVMTVANGTPQTYILYEATGPTWSQTRWKEAAQHIQTKTNGLFVNNP
TFYACIEGEFSDNMKGGLLEQASQLLRDFQATPVEWLREESFVSLSAYTGQWKNVLPAANHQDINVQLALRERLGGKTRV
VVGTPIITIEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014794 [H]

Pfam domain/function: PF08680 DUF1779 [H]

EC number: NA

Molecular weight: Translated: 28951; Mature: 28951

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKRMKWLMALVLTSLFLAAWQYRTEGVRGDEWSVPMETMAHTLTKHGASLGRWIIYTR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEH
EYAHDIQNDADFFKKMDELKQTYRSFHWSFEKTSHGKKAIGTNESPFFQEQIQLVMTVAN
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHEEEECC
GTPQTYILYEATGPTWSQTRWKEAAQHIQTKTNGLFVNNPTFYACIEGEFSDNMKGGLLE
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCHHH
QASQLLRDFQATPVEWLREESFVSLSAYTGQWKNVLPAANHQDINVQLALRERLGGKTRV
HHHHHHHHHCCCHHHHHHHHCEEEEEECCCCHHHCCCCCCCCCEEEEEEEHHHHCCCEEE
VVGTPIITIEY
EEECEEEEEEC
>Mature Secondary Structure
MRKKRMKWLMALVLTSLFLAAWQYRTEGVRGDEWSVPMETMAHTLTKHGASLGRWIIYTR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEH
EYAHDIQNDADFFKKMDELKQTYRSFHWSFEKTSHGKKAIGTNESPFFQEQIQLVMTVAN
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHEEEECC
GTPQTYILYEATGPTWSQTRWKEAAQHIQTKTNGLFVNNPTFYACIEGEFSDNMKGGLLE
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCHHH
QASQLLRDFQATPVEWLREESFVSLSAYTGQWKNVLPAANHQDINVQLALRERLGGKTRV
HHHHHHHHHCCCHHHHHHHHCEEEEEECCCCHHHCCCCCCCCCEEEEEEEHHHHCCCEEE
VVGTPIITIEY
EEECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]