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The map label for this gene is tagD [H]

Identifier: 138896893

GI number: 138896893

Start: 3374135

End: 3374542

Strand: Reverse

Name: tagD [H]

Synonym: GTNG_3262

Alternate gene names: 138896893

Gene position: 3374542-3374135 (Counterclockwise)

Preceding gene: 138896894

Following gene: 138896892

Centisome position: 95.05

GC content: 28.19

Gene sequence:

>408_bases
ATGAAACGGATAATTACATACGGTACGTTTGATTTACTGCATTACGGACATATTAACTTACTGAAACGTGCAAAGCAATT
AGGTGACTATTTAATTGTTGCTTTATCAACAGATGAGTTTAATAAAATAAAAGGAAAAGAATCATATTTTTCTTATGAGC
AAAGAAAACTTTTATTGGAAGCTATTAAATATGTGGATGAAGTAATTCCTGAAGAAAGTTGGGATCAAAAAATTAATGAT
GTTATTTCGTATAAGATAGACGTATTTGTAATGGGAGATGATTGGAAAGGAAAATTTGATTTTTTGAAAGATTATTGTGA
GGTTGTTTATCTTCCACGAACACCAGAAATTTCAACGACTAAGATCAAGTCAGATATTCAATATAATAATAGAAGCAAAA
ATAAATAA

Upstream 100 bases:

>100_bases
ATGTATGACTCGCTTTGACAGTGTTTTTGTTTACTGAACCATCTTACTCATGTTCGTTTTTTCAATCCGAACATGTATAG
TTGATATATGAGGTGAGAAT

Downstream 100 bases:

>100_bases
TAAAGTAATAAGGAGCTAAAATGTCTGTTATAAAACGACTTTCAGGTAATTTTTTTGCATTAACGTTTATGCAATTAAGT
AATTTTTTATTACCGTTATT

Product: GNAT family protein

Products: NA

Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKRIITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDEFNKIKGKESYFSYEQRKLLLEAIKYVDEVIPEESWDQKIND
VISYKIDVFVMGDDWKGKFDFLKDYCEVVYLPRTPEISTTKIKSDIQYNNRSKNK

Sequences:

>Translated_135_residues
MKRIITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDEFNKIKGKESYFSYEQRKLLLEAIKYVDEVIPEESWDQKIND
VISYKIDVFVMGDDWKGKFDFLKDYCEVVYLPRTPEISTTKIKSDIQYNNRSKNK
>Mature_135_residues
MKRIITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDEFNKIKGKESYFSYEQRKLLLEAIKYVDEVIPEESWDQKIND
VISYKIDVFVMGDDWKGKFDFLKDYCEVVYLPRTPEISTTKIKSDIQYNNRSKNK

Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]

COG id: COG0615

COG function: function code MI; Cytidylyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI4505651, Length=120, Percent_Identity=37.5, Blast_Score=77, Evalue=4e-15,
Organism=Homo sapiens, GI296841136, Length=120, Percent_Identity=37.5, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1789432, Length=138, Percent_Identity=34.7826086956522, Blast_Score=63, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17509873, Length=126, Percent_Identity=30.952380952381, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193203447, Length=126, Percent_Identity=30.952380952381, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR006409
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.39 [H]

Molecular weight: Translated: 16018; Mature: 16018

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDEFNKIKGKESYFSYEQRKLLLE
CCEEEECCHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHH
AIKYVDEVIPEESWDQKINDVISYKIDVFVMGDDWKGKFDFLKDYCEVVYLPRTPEISTT
HHHHHHHHCCCCCHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCHH
KIKSDIQYNNRSKNK
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRIITYGTFDLLHYGHINLLKRAKQLGDYLIVALSTDEFNKIKGKESYFSYEQRKLLLE
CCEEEECCHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHH
AIKYVDEVIPEESWDQKINDVISYKIDVFVMGDDWKGKFDFLKDYCEVVYLPRTPEISTT
HHHHHHHHCCCCCHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCHH
KIKSDIQYNNRSKNK
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]