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The map label for this gene is tarF [H]

Identifier: 138896891

GI number: 138896891

Start: 3371660

End: 3372883

Strand: Reverse

Name: tarF [H]

Synonym: GTNG_3260

Alternate gene names: 138896891

Gene position: 3372883-3371660 (Counterclockwise)

Preceding gene: 138896892

Following gene: 138896890

Centisome position: 95.0

GC content: 29.25

Gene sequence:

>1224_bases
ATGTGTAAAGTTATGCAAACAAAAATTGTAACATTGATATATGTTTTATTAACTCCTTTCTATTTATTATCACTGATTAT
TCCGAAAAATAAAAAATTAATAGTTTTAGGATCGTCTCTTGGACAACACTTTGCTGATAATCCAAAATATTTGTTTCTTT
ACTTAGAGAAACATTCTCCTGCCTTTGAATACTATTGGATTACCAAAAATAAAAATTTATACTTAAAAATGAAATCCGAA
CGTTTCCTCTATTTATATTCATGGAAAGGTTTATGGATTCTTTTACGGGCGAAATATCTAGTTTTATCTCATCAAGTTAA
CGACATTTTTCCGCCACTGCATGGGGGGAAGAAAATTATCCAATTATGGCACGGTACACCGTTAAAGAGATTGGGGCATG
ATAGAGATGCATTGTTAAATTCTAAAACCAAAAACTTTTTAAAGAAAATTTTTTATGCCGTATTTCCCCACTTGTATTAT
ATGAGAGCAGACTATATTATTGTAGCTGCGGATAACCAAAAGAAGATTTTTAGCTCAGCCTTTAAGCTTCCTGAGAAAAA
GATATTTGTCTTGGGACAGCCGAGAAACGATATTTTGTTTCAAAAAGAAAAAATATCATCTGTTTATACAGACAAAACAG
ACTTTCTTCATACACTGTCTTCTTACAATAAAGTTATTAGCTGGCTTCCAACACATAGACATGGTAGTAATAAAAATATT
ATGAATTTATTATTCGACTATTCTTTTAATCCTAAAGAAATTAATCGGCAGTTAAAAGAAAATAACAGCATTTTAATTAT
CAAGCCACATTTCATAGAACTGAATGTATTAAAGGATAAATTAGAAAACTTTAGTCATATTTATATATATGATGAAGCCG
ACCCATATCCATTGTTATCGTTTACCGATATCTTAGTAACGGATTACTCGAGTATAGTGTTTGACTTTTCTATGACGAAA
AAGCCGATTATATTGGCTCCTTTTGATTATGATGAGTATTTAAATAATTTCAAAGACTTTTATTATAACTATGATATTCT
TTTAAAGGATTATCCTAAAGTATATGACTGGAAGGAATTAATGAATTTGATTTTTTGCGAAAAAAAAATAATCGAAGGTC
GAAATTTTTTAGCTGAATTTAATCAATTTGAAGGAAATAGCTGTGAGAGAGTCGTGAAATTTTTGGAGAATCTAGTTACA
GGTTCCTTATATATAAATGACTAA

Upstream 100 bases:

>100_bases
ATTTATATCATTACGTCTGTTCTTATTGTTACGCAGTTGATCGTTTTGGGGATTCGAGTGTATGGTATGAAAACTAAATT
AGGGTTATCGTTGAAGGAGA

Downstream 100 bases:

>100_bases
CTATTTCGAATGGTTTGATTATCGTTACTTCGTTCTTTTCCATACTATAGCTAGAATTCAGGAACGAAGGAGCGATAAAA
GCAATGCACGTCACACAATC

Product: putative glycerophosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MCKVMQTKIVTLIYVLLTPFYLLSLIIPKNKKLIVLGSSLGQHFADNPKYLFLYLEKHSPAFEYYWITKNKNLYLKMKSE
RFLYLYSWKGLWILLRAKYLVLSHQVNDIFPPLHGGKKIIQLWHGTPLKRLGHDRDALLNSKTKNFLKKIFYAVFPHLYY
MRADYIIVAADNQKKIFSSAFKLPEKKIFVLGQPRNDILFQKEKISSVYTDKTDFLHTLSSYNKVISWLPTHRHGSNKNI
MNLLFDYSFNPKEINRQLKENNSILIIKPHFIELNVLKDKLENFSHIYIYDEADPYPLLSFTDILVTDYSSIVFDFSMTK
KPIILAPFDYDEYLNNFKDFYYNYDILLKDYPKVYDWKELMNLIFCEKKIIEGRNFLAEFNQFEGNSCERVVKFLENLVT
GSLYIND

Sequences:

>Translated_407_residues
MCKVMQTKIVTLIYVLLTPFYLLSLIIPKNKKLIVLGSSLGQHFADNPKYLFLYLEKHSPAFEYYWITKNKNLYLKMKSE
RFLYLYSWKGLWILLRAKYLVLSHQVNDIFPPLHGGKKIIQLWHGTPLKRLGHDRDALLNSKTKNFLKKIFYAVFPHLYY
MRADYIIVAADNQKKIFSSAFKLPEKKIFVLGQPRNDILFQKEKISSVYTDKTDFLHTLSSYNKVISWLPTHRHGSNKNI
MNLLFDYSFNPKEINRQLKENNSILIIKPHFIELNVLKDKLENFSHIYIYDEADPYPLLSFTDILVTDYSSIVFDFSMTK
KPIILAPFDYDEYLNNFKDFYYNYDILLKDYPKVYDWKELMNLIFCEKKIIEGRNFLAEFNQFEGNSCERVVKFLENLVT
GSLYIND
>Mature_407_residues
MCKVMQTKIVTLIYVLLTPFYLLSLIIPKNKKLIVLGSSLGQHFADNPKYLFLYLEKHSPAFEYYWITKNKNLYLKMKSE
RFLYLYSWKGLWILLRAKYLVLSHQVNDIFPPLHGGKKIIQLWHGTPLKRLGHDRDALLNSKTKNFLKKIFYAVFPHLYY
MRADYIIVAADNQKKIFSSAFKLPEKKIFVLGQPRNDILFQKEKISSVYTDKTDFLHTLSSYNKVISWLPTHRHGSNKNI
MNLLFDYSFNPKEINRQLKENNSILIIKPHFIELNVLKDKLENFSHIYIYDEADPYPLLSFTDILVTDYSSIVFDFSMTK
KPIILAPFDYDEYLNNFKDFYYNYDILLKDYPKVYDWKELMNLIFCEKKIIEGRNFLAEFNQFEGNSCERVVKFLENLVT
GSLYIND

Specific function: Catalyzes the addition of a second single glycerol-P residue to the prenolpyrophosphate-linked dissacharide, to complete the linkage unit (Potential) [H]

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007554 [H]

Pfam domain/function: PF04464 Glyphos_transf [H]

EC number: NA

Molecular weight: Translated: 48377; Mature: 48377

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKVMQTKIVTLIYVLLTPFYLLSLIIPKNKKLIVLGSSLGQHFADNPKYLFLYLEKHSP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCEEEEEEECCCC
AFEYYWITKNKNLYLKMKSERFLYLYSWKGLWILLRAKYLVLSHQVNDIFPPLHGGKKII
CEEEEEEEECCEEEEEEECCEEEEEEECCCEEEEHHHHHHHHEHHHHHCCCCCCCCHHHE
QLWHGTPLKRLGHDRDALLNSKTKNFLKKIFYAVFPHLYYMRADYIIVAADNQKKIFSSA
EECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCHHHHHHH
FKLPEKKIFVLGQPRNDILFQKEKISSVYTDKTDFLHTLSSYNKVISWLPTHRHGSNKNI
HCCCCCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
MNLLFDYSFNPKEINRQLKENNSILIIKPHFIELNVLKDKLENFSHIYIYDEADPYPLLS
HHHEECCCCCHHHHHHHHHCCCCEEEEECCEEEEHHHHHHHCCCEEEEEEECCCCCCCHH
FTDILVTDYSSIVFDFSMTKKPIILAPFDYDEYLNNFKDFYYNYDILLKDYPKVYDWKEL
HHHHHHHCHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHH
MNLIFCEKKIIEGRNFLAEFNQFEGNSCERVVKFLENLVTGSLYIND
HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MCKVMQTKIVTLIYVLLTPFYLLSLIIPKNKKLIVLGSSLGQHFADNPKYLFLYLEKHSP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCEEEEEEECCCC
AFEYYWITKNKNLYLKMKSERFLYLYSWKGLWILLRAKYLVLSHQVNDIFPPLHGGKKII
CEEEEEEEECCEEEEEEECCEEEEEEECCCEEEEHHHHHHHHEHHHHHCCCCCCCCHHHE
QLWHGTPLKRLGHDRDALLNSKTKNFLKKIFYAVFPHLYYMRADYIIVAADNQKKIFSSA
EECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEEEECCCHHHHHHH
FKLPEKKIFVLGQPRNDILFQKEKISSVYTDKTDFLHTLSSYNKVISWLPTHRHGSNKNI
HCCCCCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
MNLLFDYSFNPKEINRQLKENNSILIIKPHFIELNVLKDKLENFSHIYIYDEADPYPLLS
HHHEECCCCCHHHHHHHHHCCCCEEEEECCEEEEHHHHHHHCCCEEEEEEECCCCCCCHH
FTDILVTDYSSIVFDFSMTKKPIILAPFDYDEYLNNFKDFYYNYDILLKDYPKVYDWKEL
HHHHHHHCHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHH
MNLIFCEKKIIEGRNFLAEFNQFEGNSCERVVKFLENLVTGSLYIND
HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11882717 [H]