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The map label for this gene is kfoC [H]

Identifier: 138896887

GI number: 138896887

Start: 3368200

End: 3369150

Strand: Reverse

Name: kfoC [H]

Synonym: GTNG_3256

Alternate gene names: 138896887

Gene position: 3369150-3368200 (Counterclockwise)

Preceding gene: 138896888

Following gene: 138896886

Centisome position: 94.9

GC content: 28.29

Gene sequence:

>951_bases
ATGTTGTCTGTAAGTATTATTATACCGGTATATAATGCCGAAAAAACTATAGGTATGATATTAGACAAATTATTAGAACA
AAATTACGATAAAAATTATTATGAAGTGATATTAATTGACGATGATTCAAAAGACCAAAGTGTTTCAATTATTGAAGATT
ATGTAAAACAACATTCTAATATTAAATTATATGTTAATTCGAAAAATCAAGGACGTAGTAAAACAAGAAATAATGGAATT
TTTCATGCTTCCAATGAATTATTGTTATTTCTTGATGCCGACTGTATTCCGAAATCGAAAAATTTTATTAAAAGTCATGT
AGATTTTCACAACAGAAGAAAAAATGCCATTGGTATTGGTTCCGTGTATTTTCCGGAAACTAGTCAAAACCCATTTGATA
AGTTTAGGGATAACAGGGAAAATATACGGAATCGCAGAATTAATCATGAAAATCTTGACTTTGTGTTTTTGTCGACGGCC
AATATGAGTATATCTAAAAAAAATATATTGGATTTAGGCGGATTTGACGAAGAGTTTAAATATTGGGGTGCTGAAGACAT
CGAATTGGGTTACAGAGCTTTTAAAAAGAATTTAACTATAGGAATGGTTGATATGGAAGGTGATGTGCTTCATTACGATG
AACGAGTGAATTTGGAAACATACGTGAAAAGAATTTTTTATTTTTCAAAGTACAATATCCCGATTTTGTTAAAAAAACAC
CCAGACATTATTAATCATTTTAATAATTATAAATTACTTGAACCTATTTCATTTTCTAATAAATATTTAATAAAAAAGAT
TTTTGTCCAATTTGTCGTAACAAGGTTCCACGGCGTTTTTAAATGGCTTATAAATAAAGGATGGTTTATGAACAGTAAAT
ATAGTACATTTCTTTATAAACTTTACGTTGCAAAGTTTTATTTGGAAGGCGTGAAAGAAAGACAGATTTGA

Upstream 100 bases:

>100_bases
TATTTCGTTAGATATTAAATATGAGGTATGGCTTTTATTTACATTTATTGAATATAACTTGAAATTTATTGAAAGAAACT
CAATGGAGTGAGTGTGGAAG

Downstream 100 bases:

>100_bases
AAAATGTATAACTCCAAGGAGTTGTCTGCACGAAAGGTTTGATTTTTTGGGAGGGGTTTTGTTGAAAGTAATGCATGTTG
CGGAGTATACAAAAGGTGGA

Product: glycosyltransferase

Products: NA

Alternate protein names: CS; Chondroitin polymerase; Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase; UDP-GalNAc transferase; N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase; UDP-GlcUA transferase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLSVSIIIPVYNAEKTIGMILDKLLEQNYDKNYYEVILIDDDSKDQSVSIIEDYVKQHSNIKLYVNSKNQGRSKTRNNGI
FHASNELLLFLDADCIPKSKNFIKSHVDFHNRRKNAIGIGSVYFPETSQNPFDKFRDNRENIRNRRINHENLDFVFLSTA
NMSISKKNILDLGGFDEEFKYWGAEDIELGYRAFKKNLTIGMVDMEGDVLHYDERVNLETYVKRIFYFSKYNIPILLKKH
PDIINHFNNYKLLEPISFSNKYLIKKIFVQFVVTRFHGVFKWLINKGWFMNSKYSTFLYKLYVAKFYLEGVKERQI

Sequences:

>Translated_316_residues
MLSVSIIIPVYNAEKTIGMILDKLLEQNYDKNYYEVILIDDDSKDQSVSIIEDYVKQHSNIKLYVNSKNQGRSKTRNNGI
FHASNELLLFLDADCIPKSKNFIKSHVDFHNRRKNAIGIGSVYFPETSQNPFDKFRDNRENIRNRRINHENLDFVFLSTA
NMSISKKNILDLGGFDEEFKYWGAEDIELGYRAFKKNLTIGMVDMEGDVLHYDERVNLETYVKRIFYFSKYNIPILLKKH
PDIINHFNNYKLLEPISFSNKYLIKKIFVQFVVTRFHGVFKWLINKGWFMNSKYSTFLYKLYVAKFYLEGVKERQI
>Mature_316_residues
MLSVSIIIPVYNAEKTIGMILDKLLEQNYDKNYYEVILIDDDSKDQSVSIIEDYVKQHSNIKLYVNSKNQGRSKTRNNGI
FHASNELLLFLDADCIPKSKNFIKSHVDFHNRRKNAIGIGSVYFPETSQNPFDKFRDNRENIRNRRINHENLDFVFLSTA
NMSISKKNILDLGGFDEEFKYWGAEDIELGYRAFKKNLTIGMVDMEGDVLHYDERVNLETYVKRIFYFSKYNIPILLKKH
PDIINHFNNYKLLEPISFSNKYLIKKIFVQFVVTRFHGVFKWLINKGWFMNSKYSTFLYKLYVAKFYLEGVKERQI

Specific function: Catalyzes the polymerization of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units. Each unit has the composition in beta-(1->4)-GlcUA-beta-(1->3)- GalNAc [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. CS/HAS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.4.1.175; =2.4.1.226 [H]

Molecular weight: Translated: 37438; Mature: 37438

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVSIIIPVYNAEKTIGMILDKLLEQNYDKNYYEVILIDDDSKDQSVSIIEDYVKQHSN
CEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC
IKLYVNSKNQGRSKTRNNGIFHASNELLLFLDADCIPKSKNFIKSHVDFHNRRKNAIGIG
EEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEC
SVYFPETSQNPFDKFRDNRENIRNRRINHENLDFVFLSTANMSISKKNILDLGGFDEEFK
EEECCCCCCCHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCEECCCCEEECCCCCHHHH
YWGAEDIELGYRAFKKNLTIGMVDMEGDVLHYDERVNLETYVKRIFYFSKYNIPILLKKH
HCCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHEECCCEEEEECC
PDIINHFNNYKLLEPISFSNKYLIKKIFVQFVVTRFHGVFKWLINKGWFMNSKYSTFLYK
CHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
LYVAKFYLEGVKERQI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSVSIIIPVYNAEKTIGMILDKLLEQNYDKNYYEVILIDDDSKDQSVSIIEDYVKQHSN
CEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC
IKLYVNSKNQGRSKTRNNGIFHASNELLLFLDADCIPKSKNFIKSHVDFHNRRKNAIGIG
EEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEC
SVYFPETSQNPFDKFRDNRENIRNRRINHENLDFVFLSTANMSISKKNILDLGGFDEEFK
EEECCCCCCCHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCEECCCCEEECCCCCHHHH
YWGAEDIELGYRAFKKNLTIGMVDMEGDVLHYDERVNLETYVKRIFYFSKYNIPILLKKH
HCCCCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHEECCCEEEEECC
PDIINHFNNYKLLEPISFSNKYLIKKIFVQFVVTRFHGVFKWLINKGWFMNSKYSTFLYK
CHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
LYVAKFYLEGVKERQI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11943778 [H]