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The map label for this gene is yurN [H]

Identifier: 138896842

GI number: 138896842

Start: 3311948

End: 3312826

Strand: Reverse

Name: yurN [H]

Synonym: GTNG_3205

Alternate gene names: 138896842

Gene position: 3312826-3311948 (Counterclockwise)

Preceding gene: 138896843

Following gene: 138896841

Centisome position: 93.31

GC content: 48.24

Gene sequence:

>879_bases
ATGAATAAGCACACGGCAAAAGTGGGTTGGCTGCTCGCCAGCCCATACCTTATCTATTCCGCTATTTTCTTTTTAATCCC
TTTATTTTGGGCGTTATATCTCGCCTTTACGAACTGGAACTTGATTTCTCCAGAATATGAGACAGTAGGGGTTCAAAATT
TTATCGATGCGTTGTTCAGTCCGAGTGTGCGGGCTGCGTTTTGGGTGACGTACAAGTTTATGCTGATGTTTGTGCCGATC
GTTATCGCTGGCTCGCTGATTTTGGCGTTGATCATTCATCATCTGCCACGGTGGAAAGGGCTCTTTGCCGTTGGGTATTT
TTTGCCGTACTTAGCGTCAGGAGTAGCATCGGCGATTGTCGTCAAAGGGGTTATTTCTTACAACAGTCCGTTCAATCAAT
TTTTACGAGATGTGTTTGGTCTCGATATTGACTGGCTCGGGTCTCCGACCTTGGCGGCGCTAGTGATCGTGCTGATGATG
GCGTGGAAGTTTGTCGGTTACTATGCGCTCTTGTTTTTATCGGGTCTTGAAAGTATTCCGAAAGAAGTCTATGAGGCGGC
TGAAATCGACGGTGCGGTCGGCTGGAAGCGGGTTTGGCACGTGACTATTCCAATGCTGTACCCTTCGTTTTATACCGTGA
CGATTTTAGCAGTCGGCTTGATGTTTGGCATTTTCACGGAGCCATATGTGTTGACGGGCGGCGGGCCGGAGTATGCGACC
CATACGTGGCAGCTGGAGATTTACAACCAGGCGTTTGAAAAATTAAACGCAGGTTACGGAACGGCGGTCGCGATCATCAA
TTCGATCGTCACCTTTGCGTCGATTTTCATCTTTCGCAAGCTGTTGGAAAAATGGGGTGGCAGACATGGTTGGGAGTAA

Upstream 100 bases:

>100_bases
ATCGGCAAACAAGCGTTGAACCCCGTTGTTAAAGGTGAGAAAACCCCTGAAAAAGCTTGGAAGGATATGGAGAAAGCGAT
CGATGGGGTGTTAAAGTAAC

Downstream 100 bases:

>100_bases
ACGATGGAAGGTTGGCTTGCTTTATGTGCTGGCGTTTGCGGTTTTGTTCGTCATGGTTTTCCCGTATTTGTATATGGTGT
TAGGCTCGCTTGCTCCATGG

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNKHTAKVGWLLASPYLIYSAIFFLIPLFWALYLAFTNWNLISPEYETVGVQNFIDALFSPSVRAAFWVTYKFMLMFVPI
VIAGSLILALIIHHLPRWKGLFAVGYFLPYLASGVASAIVVKGVISYNSPFNQFLRDVFGLDIDWLGSPTLAALVIVLMM
AWKFVGYYALLFLSGLESIPKEVYEAAEIDGAVGWKRVWHVTIPMLYPSFYTVTILAVGLMFGIFTEPYVLTGGGPEYAT
HTWQLEIYNQAFEKLNAGYGTAVAIINSIVTFASIFIFRKLLEKWGGRHGWE

Sequences:

>Translated_292_residues
MNKHTAKVGWLLASPYLIYSAIFFLIPLFWALYLAFTNWNLISPEYETVGVQNFIDALFSPSVRAAFWVTYKFMLMFVPI
VIAGSLILALIIHHLPRWKGLFAVGYFLPYLASGVASAIVVKGVISYNSPFNQFLRDVFGLDIDWLGSPTLAALVIVLMM
AWKFVGYYALLFLSGLESIPKEVYEAAEIDGAVGWKRVWHVTIPMLYPSFYTVTILAVGLMFGIFTEPYVLTGGGPEYAT
HTWQLEIYNQAFEKLNAGYGTAVAIINSIVTFASIFIFRKLLEKWGGRHGWE
>Mature_292_residues
MNKHTAKVGWLLASPYLIYSAIFFLIPLFWALYLAFTNWNLISPEYETVGVQNFIDALFSPSVRAAFWVTYKFMLMFVPI
VIAGSLILALIIHHLPRWKGLFAVGYFLPYLASGVASAIVVKGVISYNSPFNQFLRDVFGLDIDWLGSPTLAALVIVLMM
AWKFVGYYALLFLSGLESIPKEVYEAAEIDGAVGWKRVWHVTIPMLYPSFYTVTILAVGLMFGIFTEPYVLTGGGPEYAT
HTWQLEIYNQAFEKLNAGYGTAVAIINSIVTFASIFIFRKLLEKWGGRHGWE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=265, Percent_Identity=27.5471698113208, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787570, Length=270, Percent_Identity=27.037037037037, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790465, Length=220, Percent_Identity=27.7272727272727, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32903; Mature: 32903

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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EEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]