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The map label for this gene is yvcK [H]

Identifier: 138896651

GI number: 138896651

Start: 3111434

End: 3112387

Strand: Reverse

Name: yvcK [H]

Synonym: GTNG_3014

Alternate gene names: 138896651

Gene position: 3112387-3111434 (Counterclockwise)

Preceding gene: 138896652

Following gene: 138896650

Centisome position: 87.66

GC content: 52.94

Gene sequence:

>954_bases
ATGAGAGATGAACAAACAGCAAAAGTTGTTGTCATCGGCGGTGGCACCGGGCTTCCTGTCTTGTTGCGGGGGCTGAAGCA
ATATGATCTTGACTTAACTGCCATTGTCACCGTCGCCGATGACGGGGGAAGCTCCGGGCGGCTGCGCGATGAGTTGCGCG
TCCCCCCGCCTGGGGATGTTCGCAACGTGTTGGCAGCGCTGTCTGACGTCGAACCGCTCATTGTCGAGTTGTTTCAACAT
CGCTTTCAAAATGGCAATGGCTTATCCGGCCATTCGCTCGGCAATTTAATTTTAGCGGCGCTCACATCGATCACCGGTGA
TTTTATGACGGCGATTCGCGAAATGAGCAAAGTGCTGAACGTGCACGGTCAAGTGCTGCCAGCGGCGAACAAAAGTGTCG
TGCTTCATGCTGAAATGGAAGATGGTTCGATTGTTTCCGGCGAGTCCAAAATTCCGAATACGGGAAAAAAGATTCAGAGG
GTGTTTTTAACTCCGGAAGATATTGAACCGCTGCCGGAAACGATTGACGCCATCCGCTGCGCCGATTTGATCGTCATCGC
ACCGGGAAGTCTATATACGAGCATTTTGCCAAATTTGCTCGTGCCAAAAATCGGGCAGGAAGTATGCAAGGCGAAAGCGA
AAAAAGTATATATATGCAACATTATGACCCAGGCTGGCGAGACGCCTCACTATACGGTGAGTGATCATGTGAAGGCGCTT
CACAGCCACCTTGGCTGCCCGTTTTTAGATGCAGTGATCGTCAACAACGGGGCGATTCCGGAAGCGATCCGCCGCCGCTA
CGAGGAGGAGCGGGCCGAGCCGGTGCGTGACGATAGCAGCGGACTTGGCGTCCAAGTGATTCATGACAACATCGTTACGT
ATGATGATGGGGTCATTCGTCATAATACAACGAAAGTCGCCTCCCTTCTTCTTGGGCTGCTTCCCCGCCGCTAG

Upstream 100 bases:

>100_bases
GCTCGGTGGCGTTGGCGGAATATATCGCTCGCCATTTTTCTGCCGATTATAAAACGGTTGTCTCGCACCGGGACATGGAG
AGGAGAAAGGAAGCGCATCG

Downstream 100 bases:

>100_bases
GCAGACGCCGGGCGGCTCGGGGCAAGATATTGTGATGAAGCACCGGAGTGAGGAGGCGACAGATGGCCGCGCCGAGGTTC
AGACACCTCCAACCGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRDEQTAKVVVIGGGTGLPVLLRGLKQYDLDLTAIVTVADDGGSSGRLRDELRVPPPGDVRNVLAALSDVEPLIVELFQH
RFQNGNGLSGHSLGNLILAALTSITGDFMTAIREMSKVLNVHGQVLPAANKSVVLHAEMEDGSIVSGESKIPNTGKKIQR
VFLTPEDIEPLPETIDAIRCADLIVIAPGSLYTSILPNLLVPKIGQEVCKAKAKKVYICNIMTQAGETPHYTVSDHVKAL
HSHLGCPFLDAVIVNNGAIPEAIRRRYEEERAEPVRDDSSGLGVQVIHDNIVTYDDGVIRHNTTKVASLLLGLLPRR

Sequences:

>Translated_317_residues
MRDEQTAKVVVIGGGTGLPVLLRGLKQYDLDLTAIVTVADDGGSSGRLRDELRVPPPGDVRNVLAALSDVEPLIVELFQH
RFQNGNGLSGHSLGNLILAALTSITGDFMTAIREMSKVLNVHGQVLPAANKSVVLHAEMEDGSIVSGESKIPNTGKKIQR
VFLTPEDIEPLPETIDAIRCADLIVIAPGSLYTSILPNLLVPKIGQEVCKAKAKKVYICNIMTQAGETPHYTVSDHVKAL
HSHLGCPFLDAVIVNNGAIPEAIRRRYEEERAEPVRDDSSGLGVQVIHDNIVTYDDGVIRHNTTKVASLLLGLLPRR
>Mature_317_residues
MRDEQTAKVVVIGGGTGLPVLLRGLKQYDLDLTAIVTVADDGGSSGRLRDELRVPPPGDVRNVLAALSDVEPLIVELFQH
RFQNGNGLSGHSLGNLILAALTSITGDFMTAIREMSKVLNVHGQVLPAANKSVVLHAEMEDGSIVSGESKIPNTGKKIQR
VFLTPEDIEPLPETIDAIRCADLIVIAPGSLYTSILPNLLVPKIGQEVCKAKAKKVYICNIMTQAGETPHYTVSDHVKAL
HSHLGCPFLDAVIVNNGAIPEAIRRRYEEERAEPVRDDSSGLGVQVIHDNIVTYDDGVIRHNTTKVASLLLGLLPRR

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=270, Percent_Identity=34.8148148148148, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 34213; Mature: 34213

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDEQTAKVVVIGGGTGLPVLLRGLKQYDLDLTAIVTVADDGGSSGRLRDELRVPPPGDV
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH
RNVLAALSDVEPLIVELFQHRFQNGNGLSGHSLGNLILAALTSITGDFMTAIREMSKVLN
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHGQVLPAANKSVVLHAEMEDGSIVSGESKIPNTGKKIQRVFLTPEDIEPLPETIDAIRC
HCCCEEECCCCEEEEEEECCCCCEECCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHH
ADLIVIAPGSLYTSILPNLLVPKIGQEVCKAKAKKVYICNIMTQAGETPHYTVSDHVKAL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCEEHHHHHHHH
HSHLGCPFLDAVIVNNGAIPEAIRRRYEEERAEPVRDDSSGLGVQVIHDNIVTYDDGVIR
HHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCEEE
HNTTKVASLLLGLLPRR
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDEQTAKVVVIGGGTGLPVLLRGLKQYDLDLTAIVTVADDGGSSGRLRDELRVPPPGDV
CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH
RNVLAALSDVEPLIVELFQHRFQNGNGLSGHSLGNLILAALTSITGDFMTAIREMSKVLN
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHGQVLPAANKSVVLHAEMEDGSIVSGESKIPNTGKKIQRVFLTPEDIEPLPETIDAIRC
HCCCEEECCCCEEEEEEECCCCCEECCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHH
ADLIVIAPGSLYTSILPNLLVPKIGQEVCKAKAKKVYICNIMTQAGETPHYTVSDHVKAL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCEEHHHHHHHH
HSHLGCPFLDAVIVNNGAIPEAIRRRYEEERAEPVRDDSSGLGVQVIHDNIVTYDDGVIR
HHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCEEE
HNTTKVASLLLGLLPRR
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]