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The map label for this gene is cggR [H]

Identifier: 138896645

GI number: 138896645

Start: 3105681

End: 3106700

Strand: Reverse

Name: cggR [H]

Synonym: GTNG_3008

Alternate gene names: 138896645

Gene position: 3106700-3105681 (Counterclockwise)

Preceding gene: 138896646

Following gene: 138896644

Centisome position: 87.5

GC content: 53.53

Gene sequence:

>1020_bases
ATGCAATCGTTATTAGAGGCACAAAAAAAATTATTGCCTGACTTGCTTGAGGTTATGCAAAAACGGTATCAAATTTTGCA
CTCTATTTCGCTCATGGCACCGATCGGGAGACGGGCGCTAGCCGCCAGCCTTGGCATGAGCGAGCGAGTGCTTCGATCGG
AAACCGAATTTTTAAAAGGGCAAAACTTGCTTTCTACCGATGTGTCAGGCATGCGGTTAACGGAAGAAGGCCAGGCGTTG
CTTCACACGCTTAATGACTTGATGAGGGAAGCGCTTGGGCTCAAGGAATTGGAAACAGCGCTGAAACAGCGGTTGAACGT
TGCGCGCGTTGTTGTGGTCGCTGGGGATAGTGACCGTTCTCCTTGGGTAAAAAAAGAATTGGGAAGAGCGTGTGTCGCCT
GCATGAAAGAACAGCTCCGGCCCGGCGATATTGTCGCTGTGGCTGGCGGAACGACCATGGCAGCGGTGGCTGAAATGATG
ACGCCGGATCCGAAGCTTGCTGATGTGTTGTTCGTCCCGGCGCGCGGAGGGCTTGGTGAAGATGTTGAAAACCAAGCGAA
TACGATTTGCGCCAAAATGGCGGAAAAAGCGACCGGCCGTTACCGGCTGTTGCATGTACCTGACCAGCTGAGCGGTGAGG
CGTATGCATCGCTCATTGAAGAACCGGCAGTGAAAGAAGTACTTGAGCTGATTCAATCGTGCCGTATGGTCGTCCATGGC
ATCGGCGAAGCAGTGACGATGGCGAAACGGCGGAAGACGCCGCCTGTGGAGATGGAAAAAATCATCGCCCGCCATGCGGT
CGCCGAGGCGTTTGGTTATTATTTCAATGAACACGGTGATGTCGTCCACAAAGTAAAAACCGTCGGCATTCAGCTCGAAA
ACCTCCCGCATGTTGAACATGTCATCGCCGTCGCTGGAGGCGCCTCGAAGGCGAAGGCCATTCAGGCGTACATAAAGCGG
GCACCGCATTCCCTCTTGGTGACGGACGAAGGCGCCGCCAAAGCGTTAGTAGGGGATTAA

Upstream 100 bases:

>100_bases
ATGAAGATGAAGTGGGAGGAATTTTTTATGGACTAGTGGGACATAATATGTCATACCGGGACGTATAATGTCCCTATGAT
TGGTTAGGGAGAAAGGTTTG

Downstream 100 bases:

>100_bases
CGTCCCTTGCCGATACAAATCATCCATAATGTAAGGAGGAAAATACGATGGCAGTAAAAATTGGGATTAACGGATTTGGC
CGTATCGGGCGTAACGTGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQSLLEAQKKLLPDLLEVMQKRYQILHSISLMAPIGRRALAASLGMSERVLRSETEFLKGQNLLSTDVSGMRLTEEGQAL
LHTLNDLMREALGLKELETALKQRLNVARVVVVAGDSDRSPWVKKELGRACVACMKEQLRPGDIVAVAGGTTMAAVAEMM
TPDPKLADVLFVPARGGLGEDVENQANTICAKMAEKATGRYRLLHVPDQLSGEAYASLIEEPAVKEVLELIQSCRMVVHG
IGEAVTMAKRRKTPPVEMEKIIARHAVAEAFGYYFNEHGDVVHKVKTVGIQLENLPHVEHVIAVAGGASKAKAIQAYIKR
APHSLLVTDEGAAKALVGD

Sequences:

>Translated_339_residues
MQSLLEAQKKLLPDLLEVMQKRYQILHSISLMAPIGRRALAASLGMSERVLRSETEFLKGQNLLSTDVSGMRLTEEGQAL
LHTLNDLMREALGLKELETALKQRLNVARVVVVAGDSDRSPWVKKELGRACVACMKEQLRPGDIVAVAGGTTMAAVAEMM
TPDPKLADVLFVPARGGLGEDVENQANTICAKMAEKATGRYRLLHVPDQLSGEAYASLIEEPAVKEVLELIQSCRMVVHG
IGEAVTMAKRRKTPPVEMEKIIARHAVAEAFGYYFNEHGDVVHKVKTVGIQLENLPHVEHVIAVAGGASKAKAIQAYIKR
APHSLLVTDEGAAKALVGD
>Mature_339_residues
MQSLLEAQKKLLPDLLEVMQKRYQILHSISLMAPIGRRALAASLGMSERVLRSETEFLKGQNLLSTDVSGMRLTEEGQAL
LHTLNDLMREALGLKELETALKQRLNVARVVVVAGDSDRSPWVKKELGRACVACMKEQLRPGDIVAVAGGTTMAAVAEMM
TPDPKLADVLFVPARGGLGEDVENQANTICAKMAEKATGRYRLLHVPDQLSGEAYASLIEEPAVKEVLELIQSCRMVVHG
IGEAVTMAKRRKTPPVEMEKIIARHAVAEAFGYYFNEHGDVVHKVKTVGIQLENLPHVEHVIAVAGGASKAKAIQAYIKR
APHSLLVTDEGAAKALVGD

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=257, Percent_Identity=26.4591439688716, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082414, Length=249, Percent_Identity=24.8995983935743, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 36819; Mature: 36819

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLLEAQKKLLPDLLEVMQKRYQILHSISLMAPIGRRALAASLGMSERVLRSETEFLKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
QNLLSTDVSGMRLTEEGQALLHTLNDLMREALGLKELETALKQRLNVARVVVVAGDSDRS
CCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCCCCC
PWVKKELGRACVACMKEQLRPGDIVAVAGGTTMAAVAEMMTPDPKLADVLFVPARGGLGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
DVENQANTICAKMAEKATGRYRLLHVPDQLSGEAYASLIEEPAVKEVLELIQSCRMVVHG
CHHHHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGEAVTMAKRRKTPPVEMEKIIARHAVAEAFGYYFNEHGDVVHKVKTVGIQLENLPHVEH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCHHHH
VIAVAGGASKAKAIQAYIKRAPHSLLVTDEGAAKALVGD
HHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHCCCC
>Mature Secondary Structure
MQSLLEAQKKLLPDLLEVMQKRYQILHSISLMAPIGRRALAASLGMSERVLRSETEFLKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
QNLLSTDVSGMRLTEEGQALLHTLNDLMREALGLKELETALKQRLNVARVVVVAGDSDRS
CCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCCCCC
PWVKKELGRACVACMKEQLRPGDIVAVAGGTTMAAVAEMMTPDPKLADVLFVPARGGLGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
DVENQANTICAKMAEKATGRYRLLHVPDQLSGEAYASLIEEPAVKEVLELIQSCRMVVHG
CHHHHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGEAVTMAKRRKTPPVEMEKIIARHAVAEAFGYYFNEHGDVVHKVKTVGIQLENLPHVEH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEECCCCHHHH
VIAVAGGASKAKAIQAYIKRAPHSLLVTDEGAAKALVGD
HHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]