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The map label for this gene is yusF [H]

Identifier: 138896591

GI number: 138896591

Start: 3052887

End: 3053267

Strand: Reverse

Name: yusF [H]

Synonym: GTNG_2954

Alternate gene names: 138896591

Gene position: 3053267-3052887 (Counterclockwise)

Preceding gene: 138896592

Following gene: 138896590

Centisome position: 86.0

GC content: 54.33

Gene sequence:

>381_bases
TTGAAGTTAGGTGGGTCGGACATGCGACGGGCAGAAAAAGTGATTATTGTAGAAGGGCGATCGGATAAACAAAAAGTGTC
GGCCGTGCTGAACGAACCGGTCGTCATTATTTGTACGAACGGCACGATCAGTGATTCGCGCCTTGAGGAGCTGGCCGACG
AGCTTGAGGGTCAGGACGTGTACGTGTTGGCAGACGCTGATGAAGCAGGAGAAAAGCTGCGCCGGCAATTTCGACGGATG
TTTCCGGAAGCGGAACACATTTATATTGACCGGACGTACCGCGAAGTGGCCGCCGCTCCGCGTTGGCATTTAGCCCAAGT
GTTGCTGCGCGCCCATTTTGACGTCCGCATCGACTCGTTAATGAAGGGAAGAGGCGAGTGA

Upstream 100 bases:

>100_bases
TGCGACGGGGAGGCGGGTTGGTGTTGAAAGGCAACGGTGGATGGCCGTTGCTTTTTTTCAACTTTTTGTTGGCGCAGAGC
ATACAATATGGTAACCTTTT

Downstream 100 bases:

>100_bases
AACCGATTGAACGAACAGAGATACAACAGACAATCACTGAACAGCCGCTTATGGCTCTTTATTTGTACACCCCGCTGTGC
GGCACGTGCCAGCTGGCGAA

Product: DNA primase and small primase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKLGGSDMRRAEKVIIVEGRSDKQKVSAVLNEPVVIICTNGTISDSRLEELADELEGQDVYVLADADEAGEKLRRQFRRM
FPEAEHIYIDRTYREVAAAPRWHLAQVLLRAHFDVRIDSLMKGRGE

Sequences:

>Translated_126_residues
MKLGGSDMRRAEKVIIVEGRSDKQKVSAVLNEPVVIICTNGTISDSRLEELADELEGQDVYVLADADEAGEKLRRQFRRM
FPEAEHIYIDRTYREVAAAPRWHLAQVLLRAHFDVRIDSLMKGRGE
>Mature_126_residues
MKLGGSDMRRAEKVIIVEGRSDKQKVSAVLNEPVVIICTNGTISDSRLEELADELEGQDVYVLADADEAGEKLRRQFRRM
FPEAEHIYIDRTYREVAAAPRWHLAQVLLRAHFDVRIDSLMKGRGE

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 14368; Mature: 14368

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGGSDMRRAEKVIIVEGRSDKQKVSAVLNEPVVIICTNGTISDSRLEELADELEGQDV
CCCCCHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCE
YVLADADEAGEKLRRQFRRMFPEAEHIYIDRTYREVAAAPRWHLAQVLLRAHFDVRIDSL
EEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH
MKGRGE
HCCCCC
>Mature Secondary Structure
MKLGGSDMRRAEKVIIVEGRSDKQKVSAVLNEPVVIICTNGTISDSRLEELADELEGQDV
CCCCCHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCE
YVLADADEAGEKLRRQFRRMFPEAEHIYIDRTYREVAAAPRWHLAQVLLRAHFDVRIDSL
EEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH
MKGRGE
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]