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The map label for this gene is yurY [H]

Identifier: 138896583

GI number: 138896583

Start: 3047165

End: 3047944

Strand: Reverse

Name: yurY [H]

Synonym: GTNG_2946

Alternate gene names: 138896583

Gene position: 3047944-3047165 (Counterclockwise)

Preceding gene: 138896584

Following gene: 138896582

Centisome position: 85.85

GC content: 49.23

Gene sequence:

>780_bases
ATGGCCGTATTAACGATTCAAAATCTCCACGTATCAGTGGAAGGAAAAGAAATTTTAAAAGGGGTTGACTTGGAAGTTAA
AGGCGGGGAAATTCACGCCATTATGGGTCCGAACGGAACGGGGAAATCGACGCTGTCATCGGCCATTATGGGCCATCCAA
AATATGAGGTGACGGCAGGCACGATTACGCTCGACGGCCAAAACGTTCTTGAGATGGAAGTAGATGAGCGGGCGCGTGCC
GGTTTGTTTTTGGCGATGCAATATCCGAGCGAAATCAGCGGGGTGACGAACGCCGACTTTTTGCGGTCAGCCATCAACGC
TCGTCTTGGTGAGGGCAATGAAATTTCGCTCATGAAATTTATCCGCAAGCTCGATGAAAAAATGTCGTTTTTGGAAATGA
ACCCGGATATGGCGCACCGCTATTTGAACGAAGGGTTCTCGGGCGGGGAGAAAAAGCGGAATGAAATTTTACAGCTGATG
ATGCTTGAGCCGAAAATCGCCATTTTGGACGAGATCGACTCCGGATTGGACATTGACGCATTAAAAATCGTCGCCAAAGG
CATTAACGAAATGCGCAGCAGCGAATTCGGCTGTTTGATCATTACCCACTATCAACGGTTGTTGAATTACATCACCCCGG
ACTATGTACACGTCATGATGCAAGGGCGCATCGTGAAATCGGGCGGTCCGGAACTGGCACAGCGGCTTGAGGCGGAAGGG
TACGATTGGATTAAGAAAGAATTGGGCATCGAAGACGAAACGGTCGGGCAAGAAGCGTAA

Upstream 100 bases:

>100_bases
ATTTGTTATAAGATTGTAATGAGAATAAAATGAGAATGAACAATCGCTGGGTCAAAAGCGAGCTTACATTATTTTTACGC
AAAAACTGGAGGTATGCTTT

Downstream 100 bases:

>100_bases
GCGTTAGGAGGAGGACTATGGCGACAGAAACGAAAATTCCATTCGATGAAACATACATCCGCACGTTCTCAAGCGAACGC
GGCGAACCGGACTGGCTGAC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAVLTIQNLHVSVEGKEILKGVDLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTAGTITLDGQNVLEMEVDERARA
GLFLAMQYPSEISGVTNADFLRSAINARLGEGNEISLMKFIRKLDEKMSFLEMNPDMAHRYLNEGFSGGEKKRNEILQLM
MLEPKIAILDEIDSGLDIDALKIVAKGINEMRSSEFGCLIITHYQRLLNYITPDYVHVMMQGRIVKSGGPELAQRLEAEG
YDWIKKELGIEDETVGQEA

Sequences:

>Translated_259_residues
MAVLTIQNLHVSVEGKEILKGVDLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTAGTITLDGQNVLEMEVDERARA
GLFLAMQYPSEISGVTNADFLRSAINARLGEGNEISLMKFIRKLDEKMSFLEMNPDMAHRYLNEGFSGGEKKRNEILQLM
MLEPKIAILDEIDSGLDIDALKIVAKGINEMRSSEFGCLIITHYQRLLNYITPDYVHVMMQGRIVKSGGPELAQRLEAEG
YDWIKKELGIEDETVGQEA
>Mature_258_residues
AVLTIQNLHVSVEGKEILKGVDLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTAGTITLDGQNVLEMEVDERARAG
LFLAMQYPSEISGVTNADFLRSAINARLGEGNEISLMKFIRKLDEKMSFLEMNPDMAHRYLNEGFSGGEKKRNEILQLMM
LEPKIAILDEIDSGLDIDALKIVAKGINEMRSSEFGCLIITHYQRLLNYITPDYVHVMMQGRIVKSGGPELAQRLEAEGY
DWIKKELGIEDETVGQEA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=30.5309734513274, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=30.5309734513274, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI42741659, Length=225, Percent_Identity=29.3333333333333, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI9961250, Length=233, Percent_Identity=29.6137339055794, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI148612844, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI255708477, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI9955963, Length=233, Percent_Identity=27.4678111587983, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=53.4412955465587, Blast_Score=271, Evalue=2e-74,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=28.1385281385281, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=28.9915966386555, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=25.7383966244726, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787500, Length=224, Percent_Identity=30.3571428571429, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=27.8481012658228, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786654, Length=243, Percent_Identity=27.9835390946502, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787792, Length=228, Percent_Identity=25, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=28.2051282051282, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=25, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=21.6666666666667, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=31.0924369747899, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=240, Percent_Identity=27.0833333333333, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=248, Percent_Identity=28.2258064516129, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=235, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=235, Percent_Identity=26.3829787234043, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=237, Percent_Identity=26.1603375527426, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=26.1603375527426, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=169, Percent_Identity=30.7692307692308, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=30.5936073059361, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=30.5936073059361, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17136662, Length=232, Percent_Identity=28.8793103448276, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076684, Length=235, Percent_Identity=28.5106382978723, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581617, Length=235, Percent_Identity=28.5106382978723, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581615, Length=235, Percent_Identity=28.5106382978723, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24659289, Length=221, Percent_Identity=26.2443438914027, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28672; Mature: 28540

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLTIQNLHVSVEGKEILKGVDLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTAG
CEEEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEE
TITLDGQNVLEMEVDERARAGLFLAMQYPSEISGVTNADFLRSAINARLGEGNEISLMKF
EEEECCCCEEEEEHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHH
IRKLDEKMSFLEMNPDMAHRYLNEGFSGGEKKRNEILQLMMLEPKIAILDEIDSGLDIDA
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHH
LKIVAKGINEMRSSEFGCLIITHYQRLLNYITPDYVHVMMQGRIVKSGGPELAQRLEAEG
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCEEEECCCHHHHHHHHCCC
YDWIKKELGIEDETVGQEA
HHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure 
AVLTIQNLHVSVEGKEILKGVDLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTAG
EEEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEE
TITLDGQNVLEMEVDERARAGLFLAMQYPSEISGVTNADFLRSAINARLGEGNEISLMKF
EEEECCCCEEEEEHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHH
IRKLDEKMSFLEMNPDMAHRYLNEGFSGGEKKRNEILQLMMLEPKIAILDEIDSGLDIDA
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHH
LKIVAKGINEMRSSEFGCLIITHYQRLLNYITPDYVHVMMQGRIVKSGGPELAQRLEAEG
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHCEEEECCCHHHHHHHHCCC
YDWIKKELGIEDETVGQEA
HHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]