Click here to switch to the map view.

The map label for this gene is yvdQ [H]

Identifier: 138896576

GI number: 138896576

Start: 3039765

End: 3040277

Strand: Reverse

Name: yvdQ [H]

Synonym: GTNG_2939

Alternate gene names: 138896576

Gene position: 3040277-3039765 (Counterclockwise)

Preceding gene: 138896578

Following gene: 138896575

Centisome position: 85.63

GC content: 42.5

Gene sequence:

>513_bases
ATGGGAATTTTAAGTGGCAATCCAAAAGAAGAACCGATGCATTATGGAGAAGTATTTGGTGTATGGTCGTATTTACTGAC
CGCTAAAGGATTATTGTCCGGATATCAAACGTTACTCAACCATACAGGTGATGAGGATTTAAAACATTTTATTGAAGATA
GCATCGAAAACGTTCTAAAACCGGAAATCCAAGAAACGGAAGCTTTGTTAAAAGAAAATGGAGTAGCACTTCCGCCATCT
CCTCCGGAACGGCCAAAAGCATGCTTGGAAGATATTCCGGCAGGCGCGAGATTTACTGACCCGGAAATTGCCGCGATGCT
GAGTAAAGATATTGCAGAGGGGTTAGTGGCATGCAGCACGATTATGGGGCAGTGCATCAGGGAAGATATTGCTTTAATGT
ATGGGCAATTTCACATGAAAAAAGCGCAATATGGTGCGAAACTGCTTAGAATGAACAAAGAAAAAGGTTGGCTCGTTCCG
CCGCCGCTCAATGTGAAAAATTCGAACTGTTAA

Upstream 100 bases:

>100_bases
GCTTTTTGAAACCCTCCACTTTTCTTTGCATAATTTAGTTCCATCCATCCACACTATCTACGGGAAGGGTGATCCATGAA
TTTTGTTAGGAGGGTTAATT

Downstream 100 bases:

>100_bases
AAAAGGGTGTTCATATGTTTAGCTAAAAGCTTGCGTAACGCAAGCTTTTCCTTTTTGTTCATGAAGGCACGCATTTGTGT
TTTGAAAAAGTTCCCCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGILSGNPKEEPMHYGEVFGVWSYLLTAKGLLSGYQTLLNHTGDEDLKHFIEDSIENVLKPEIQETEALLKENGVALPPS
PPERPKACLEDIPAGARFTDPEIAAMLSKDIAEGLVACSTIMGQCIREDIALMYGQFHMKKAQYGAKLLRMNKEKGWLVP
PPLNVKNSNC

Sequences:

>Translated_170_residues
MGILSGNPKEEPMHYGEVFGVWSYLLTAKGLLSGYQTLLNHTGDEDLKHFIEDSIENVLKPEIQETEALLKENGVALPPS
PPERPKACLEDIPAGARFTDPEIAAMLSKDIAEGLVACSTIMGQCIREDIALMYGQFHMKKAQYGAKLLRMNKEKGWLVP
PPLNVKNSNC
>Mature_169_residues
GILSGNPKEEPMHYGEVFGVWSYLLTAKGLLSGYQTLLNHTGDEDLKHFIEDSIENVLKPEIQETEALLKENGVALPPSP
PERPKACLEDIPAGARFTDPEIAAMLSKDIAEGLVACSTIMGQCIREDIALMYGQFHMKKAQYGAKLLRMNKEKGWLVPP
PLNVKNSNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021617
- InterPro:   IPR012347 [H]

Pfam domain/function: PF11553 DUF3231 [H]

EC number: NA

Molecular weight: Translated: 18768; Mature: 18637

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILSGNPKEEPMHYGEVFGVWSYLLTAKGLLSGYQTLLNHTGDEDLKHFIEDSIENVLK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PEIQETEALLKENGVALPPSPPERPKACLEDIPAGARFTDPEIAAMLSKDIAEGLVACST
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IMGQCIREDIALMYGQFHMKKAQYGAKLLRMNKEKGWLVPPPLNVKNSNC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GILSGNPKEEPMHYGEVFGVWSYLLTAKGLLSGYQTLLNHTGDEDLKHFIEDSIENVLK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PEIQETEALLKENGVALPPSPPERPKACLEDIPAGARFTDPEIAAMLSKDIAEGLVACST
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IMGQCIREDIALMYGQFHMKKAQYGAKLLRMNKEKGWLVPPPLNVKNSNC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]