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The map label for this gene is gerM [H]

Identifier: 138896232

GI number: 138896232

Start: 2704226

End: 2705302

Strand: Reverse

Name: gerM [H]

Synonym: GTNG_2595

Alternate gene names: 138896232

Gene position: 2705302-2704226 (Counterclockwise)

Preceding gene: 138896233

Following gene: 138896231

Centisome position: 76.2

GC content: 48.93

Gene sequence:

>1077_bases
ATGGGCAAACGGACGGCTCATAGATGGACAGCACCAGTGCTTGCTTCTCTTTTGCTGCTTGGCGGTTGCGGTTTGTTTGG
CAATGATGAAGCGGTGAAGGAGATCGATCCGCCGCAAGAAACGAACTACGTTAAAGACGGCCAGGCGCTTCAAGAGGCAA
CGGGAGACAAGAAAGAAGAGAAAGAGAAAGCAAAGGCTACTGAGACGGTGAAGAGGGAATTATACTTAATTGACAAAAAT
GGCTTTGTCGTGCCACAAACAGTAGAGTTGCCGAAAACGCAGGCGGTTGCGAAACAAGTGCTCGAATATTTGATTGAGGA
CGGCCCTGTGTCCGAAATTTTGCCAACAGGCTTCCGCGCCGTCATTCCAGCGGGAACGACTGTGCTTGGAACAAAATTAG
AAAAAGATGGGACGCTAATCGCCGATTTTTCGCCGGAATTTAAGCAATACAAACCAGAAGATGAAAAGCGGATTTTGCAA
GCCATTACGTGGACATTGACCCAATTTGACAATATTAAGCGTGTCAAAATTCGGATTAACGGCTATGACCAAGAGGTGAT
GCCGGTCAATAAAACACCGATCCAAGATGGAGTCAGCCGTGCGGACGGCATCAATATCGAGGCGAGTGGTGTACCGGACA
TTACGAATACACACCCGGTTACGGTTTATTTCGTCGCACAGCAGGGAGATCATACGTATTACGTACCGGTGACAAGACGC
GTCCCCAATAAAGAGAAGGACAATATCGCTGCAGCGGTCAATGAGCTCATTCAAGGGCCGGACCACGGCAGCGGGCTTGT
TGGCGCCTTCCAGCCGGATGCAAAACTTGTCGATGCCCCGAAATATGAAGACGGCAAAGTGACACTTAACTTTAACGAAG
GCATTTATGGCAGCAACAAGAAAAATGTCATTTCTGATGTCGTGTTAAATTCGCTTGTGCTATCGCTCACCGAGCAAAAC
GGAGTTGACAGCGTGGCAATCACCGTCAACGGCAAAGCCGATCTCGTCACCGAGGATGGGAAACCACTCACAAAGCCGGT
TACTCGGCCGCAAAACGTCAATACTGGAGCATTTTAA

Upstream 100 bases:

>100_bases
AAAATCCTTTAGCGTGTGGACGCTAAAGGATTTTTTTATTCTATTTTGGCAACCAGCTCGTATACATAGTAGTACAAACT
ACGAGTAGGAGGGAACGTCA

Downstream 100 bases:

>100_bases
CCAGTTGACGTTGGGCAAGCTGGAAACGAAGAGACTGTTTGTGGTATAACAAAGGGGTGGAAACGTATTCCGCCCCTTTA
TTTTTTATCAAAGCGGTGGA

Product: germination protein GerM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MGKRTAHRWTAPVLASLLLLGGCGLFGNDEAVKEIDPPQETNYVKDGQALQEATGDKKEEKEKAKATETVKRELYLIDKN
GFVVPQTVELPKTQAVAKQVLEYLIEDGPVSEILPTGFRAVIPAGTTVLGTKLEKDGTLIADFSPEFKQYKPEDEKRILQ
AITWTLTQFDNIKRVKIRINGYDQEVMPVNKTPIQDGVSRADGINIEASGVPDITNTHPVTVYFVAQQGDHTYYVPVTRR
VPNKEKDNIAAAVNELIQGPDHGSGLVGAFQPDAKLVDAPKYEDGKVTLNFNEGIYGSNKKNVISDVVLNSLVLSLTEQN
GVDSVAITVNGKADLVTEDGKPLTKPVTRPQNVNTGAF

Sequences:

>Translated_358_residues
MGKRTAHRWTAPVLASLLLLGGCGLFGNDEAVKEIDPPQETNYVKDGQALQEATGDKKEEKEKAKATETVKRELYLIDKN
GFVVPQTVELPKTQAVAKQVLEYLIEDGPVSEILPTGFRAVIPAGTTVLGTKLEKDGTLIADFSPEFKQYKPEDEKRILQ
AITWTLTQFDNIKRVKIRINGYDQEVMPVNKTPIQDGVSRADGINIEASGVPDITNTHPVTVYFVAQQGDHTYYVPVTRR
VPNKEKDNIAAAVNELIQGPDHGSGLVGAFQPDAKLVDAPKYEDGKVTLNFNEGIYGSNKKNVISDVVLNSLVLSLTEQN
GVDSVAITVNGKADLVTEDGKPLTKPVTRPQNVNTGAF
>Mature_357_residues
GKRTAHRWTAPVLASLLLLGGCGLFGNDEAVKEIDPPQETNYVKDGQALQEATGDKKEEKEKAKATETVKRELYLIDKNG
FVVPQTVELPKTQAVAKQVLEYLIEDGPVSEILPTGFRAVIPAGTTVLGTKLEKDGTLIADFSPEFKQYKPEDEKRILQA
ITWTLTQFDNIKRVKIRINGYDQEVMPVNKTPIQDGVSRADGINIEASGVPDITNTHPVTVYFVAQQGDHTYYVPVTRRV
PNKEKDNIAAAVNELIQGPDHGSGLVGAFQPDAKLVDAPKYEDGKVTLNFNEGIYGSNKKNVISDVVLNSLVLSLTEQNG
VDSVAITVNGKADLVTEDGKPLTKPVTRPQNVNTGAF

Specific function: Unknown. Affects both sporulation and germination [H]

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606 [H]

Pfam domain/function: PF10646 Germane [H]

EC number: NA

Molecular weight: Translated: 39051; Mature: 38919

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRTAHRWTAPVLASLLLLGGCGLFGNDEAVKEIDPPQETNYVKDGQALQEATGDKKEE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCHHH
KEKAKATETVKRELYLIDKNGFVVPQTVELPKTQAVAKQVLEYLIEDGPVSEILPTGFRA
HHHHHHHHHHEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEE
VIPAGTTVLGTKLEKDGTLIADFSPEFKQYKPEDEKRILQAITWTLTQFDNIKRVKIRIN
EECCCCEEEEEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC
GYDQEVMPVNKTPIQDGVSRADGINIEASGVPDITNTHPVTVYFVAQQGDHTYYVPVTRR
CCCCEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECC
VPNKEKDNIAAAVNELIQGPDHGSGLVGAFQPDAKLVDAPKYEDGKVTLNFNEGIYGSNK
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCC
KNVISDVVLNSLVLSLTEQNGVDSVAITVNGKADLVTEDGKPLTKPVTRPQNVNTGAF
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKRTAHRWTAPVLASLLLLGGCGLFGNDEAVKEIDPPQETNYVKDGQALQEATGDKKEE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCHHH
KEKAKATETVKRELYLIDKNGFVVPQTVELPKTQAVAKQVLEYLIEDGPVSEILPTGFRA
HHHHHHHHHHEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEE
VIPAGTTVLGTKLEKDGTLIADFSPEFKQYKPEDEKRILQAITWTLTQFDNIKRVKIRIN
EECCCCEEEEEEECCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC
GYDQEVMPVNKTPIQDGVSRADGINIEASGVPDITNTHPVTVYFVAQQGDHTYYVPVTRR
CCCCEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECC
VPNKEKDNIAAAVNELIQGPDHGSGLVGAFQPDAKLVDAPKYEDGKVTLNFNEGIYGSNK
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCC
KNVISDVVLNSLVLSLTEQNGVDSVAITVNGKADLVTEDGKPLTKPVTRPQNVNTGAF
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 2846748 [H]