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The map label for this gene is ysxB [H]

Identifier: 138896176

GI number: 138896176

Start: 2643350

End: 2643682

Strand: Reverse

Name: ysxB [H]

Synonym: GTNG_2539

Alternate gene names: 138896176

Gene position: 2643682-2643350 (Counterclockwise)

Preceding gene: 138896177

Following gene: 138896175

Centisome position: 74.46

GC content: 56.76

Gene sequence:

>333_bases
ATGATCCGCGTCACGATTGAACGGGAAGCGGACGGCCGCATTCGCGCGTTTACGATGGATGGGCACGCCGAGTTTGCCAA
GCGCGGGCAAGATATCGTATGTGCCGGCGCTTCGGCCGTCTCGTTTGGCACCATCAATGCCATCGAGGCGCTCACCGGCG
TTCGCCCGCACGTTTCGCTTGGCCAAGACGGAGGCTATCTTCGCTGTGAGCTTCCGAAGTTGGAAGAAGCAGCGACGGCA
GAGAAAGTGCAATTATTGTTGGAAGCGATGGTCGTCTCGTTAAAGACGATCGAACGCGATTACGGGAAGTTTATCCGCGT
GACATCTATCTAG

Upstream 100 bases:

>100_bases
TATCGTCTTCAAATATAAAGCGAAAAAGAACTATCGCCGCAAACAAGGCCACCGTCAGCCATATACGAAAGTCGTCATCG
AAAAAATCAACGCGTAAGCG

Downstream 100 bases:

>100_bases
CAGGAGGTGACTGCTATGCTGAGACTCGACTTGCAATTTTTCGCTTCGAAAAAAGGGGTCGGTTCGACAAAAAACGGCCG
TGATTCGATCGCAAAACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIRVTIEREADGRIRAFTMDGHAEFAKRGQDIVCAGASAVSFGTINAIEALTGVRPHVSLGQDGGYLRCELPKLEEAATA
EKVQLLLEAMVVSLKTIERDYGKFIRVTSI

Sequences:

>Translated_110_residues
MIRVTIEREADGRIRAFTMDGHAEFAKRGQDIVCAGASAVSFGTINAIEALTGVRPHVSLGQDGGYLRCELPKLEEAATA
EKVQLLLEAMVVSLKTIERDYGKFIRVTSI
>Mature_110_residues
MIRVTIEREADGRIRAFTMDGHAEFAKRGQDIVCAGASAVSFGTINAIEALTGVRPHVSLGQDGGYLRCELPKLEEAATA
EKVQLLLEAMVVSLKTIERDYGKFIRVTSI

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 11980; Mature: 11980

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVTIEREADGRIRAFTMDGHAEFAKRGQDIVCAGASAVSFGTINAIEALTGVRPHVSL
CEEEEEECCCCCEEEEEEECCCHHHHHCCCEEEEECCCEECCCCHHHHHHHCCCCCCCEE
GQDGGYLRCELPKLEEAATAEKVQLLLEAMVVSLKTIERDYGKFIRVTSI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MIRVTIEREADGRIRAFTMDGHAEFAKRGQDIVCAGASAVSFGTINAIEALTGVRPHVSL
CEEEEEECCCCCEEEEEEECCCHHHHHCCCEEEEECCCEECCCCHHHHHHHCCCCCCCEE
GQDGGYLRCELPKLEEAATAEKVQLLLEAMVVSLKTIERDYGKFIRVTSI
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]