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The map label for this gene is ruvB [H]

Identifier: 138896158

GI number: 138896158

Start: 2626281

End: 2627282

Strand: Reverse

Name: ruvB [H]

Synonym: GTNG_2521

Alternate gene names: 138896158

Gene position: 2627282-2626281 (Counterclockwise)

Preceding gene: 138896159

Following gene: 138896157

Centisome position: 74.0

GC content: 57.09

Gene sequence:

>1002_bases
GTGGACGAACGGCTTGTATCTGGATCAGCTTTAGGCGGCGAGGCGGCGTTCGAACCAACCTTGCGCCCGCAATATTTGCA
TGAATATATCGGGCAAGATAAGGTAAAAGAAAACTTGCAAGTGTTTATTGAAGCGGCCAAGCTGCGTGAAGAAACACTTG
ACCACGTCTTGTTGTACGGCCCGCCGGGGCTCGGGAAAACGACGCTCGCCGCCATCATTGCGAACGAAATGGGCGTCAAG
ATGCGGGCGACATCCGGGCCCGCGCTTGAGCGGCCCGGTGACTTAGCGGCGCTGTTGACATCGCTTGAGCCCGGGGATGT
GTTGTTTATTGACGAAATTCATCGGTTGCCGCGGACAGTTGAGGAAGTGCTCTATCCCGCGATGGAAGATTACTGTTTGG
ACATTACGGTCGGCAAAGGGCCTGAAGCGCGCTCGCTTCGTCTAGATTTGCCGCCGTTTACGCTTGTTGGAGCGACAACA
AGGGCCGGAGCGCTGTCCGCGCCGCTGCGCGACCGATTTGGTGTCATCAGCCGGCTTGAATATTATCAAGTGGACCAACT
AGCGCAAATTATTGAGCGGGCGGCTGCCATTTTGCATATTATCATCAACAATGAGGCGGCGCTTGAACTGGCGCGCCGGG
CGCGTGGCACGCCGCGCATTGCCAACCGTCTGCTCCGCCGTGTTCGCGATTTTGCTCAAGTGCGTGGGGACGGAGAAATT
ACGCTGCCGCTCGCCGTCGAGGCGCTTGAGCGGCTGCAAGTCGATCGACTCGGGCTTGATCACATTGACCATAAGCTGCT
TTTAGCGATCATTGAAAAGTTTGCCGGCGGTCCGGTTGGACTCGAAACGATGGCAGCGGTGATCGGAGAAGAAGCGCAAA
CGATCGAGGAAGTGTATGAGCCGTATTTGCTGCAAATCGGCTTATTGCAGCGAACGCCGCGCGGGCGTGTCGCCACGCCG
GCGGCGTATGCCCATTTAGGAATGGAGGTTCCGAAGCGGTGA

Upstream 100 bases:

>100_bases
CGCGAAGAAACGATGTCGACGGAACAGTACGTGAAGCGGGCGTTGGCCATGTTACTGAAATAAATGGCTGTTGGCAACGA
GCCAAAAGGGAGGGACGACG

Downstream 100 bases:

>100_bases
ACAGCTTGCCTAAGTTGATTATGATAATCGGCGTTGTGCTTATCATCGTTGGGTTTGTTATGCAGTTTGTCAAACTCGGC
CGCTTGCCGGGGGATATCGT

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDERLVSGSALGGEAAFEPTLRPQYLHEYIGQDKVKENLQVFIEAAKLREETLDHVLLYGPPGLGKTTLAAIIANEMGVK
MRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRTVEEVLYPAMEDYCLDITVGKGPEARSLRLDLPPFTLVGATT
RAGALSAPLRDRFGVISRLEYYQVDQLAQIIERAAAILHIIINNEAALELARRARGTPRIANRLLRRVRDFAQVRGDGEI
TLPLAVEALERLQVDRLGLDHIDHKLLLAIIEKFAGGPVGLETMAAVIGEEAQTIEEVYEPYLLQIGLLQRTPRGRVATP
AAYAHLGMEVPKR

Sequences:

>Translated_333_residues
MDERLVSGSALGGEAAFEPTLRPQYLHEYIGQDKVKENLQVFIEAAKLREETLDHVLLYGPPGLGKTTLAAIIANEMGVK
MRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRTVEEVLYPAMEDYCLDITVGKGPEARSLRLDLPPFTLVGATT
RAGALSAPLRDRFGVISRLEYYQVDQLAQIIERAAAILHIIINNEAALELARRARGTPRIANRLLRRVRDFAQVRGDGEI
TLPLAVEALERLQVDRLGLDHIDHKLLLAIIEKFAGGPVGLETMAAVIGEEAQTIEEVYEPYLLQIGLLQRTPRGRVATP
AAYAHLGMEVPKR
>Mature_333_residues
MDERLVSGSALGGEAAFEPTLRPQYLHEYIGQDKVKENLQVFIEAAKLREETLDHVLLYGPPGLGKTTLAAIIANEMGVK
MRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRTVEEVLYPAMEDYCLDITVGKGPEARSLRLDLPPFTLVGATT
RAGALSAPLRDRFGVISRLEYYQVDQLAQIIERAAAILHIIINNEAALELARRARGTPRIANRLLRRVRDFAQVRGDGEI
TLPLAVEALERLQVDRLGLDHIDHKLLLAIIEKFAGGPVGLETMAAVIGEEAQTIEEVYEPYLLQIGLLQRTPRGRVATP
AAYAHLGMEVPKR

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=330, Percent_Identity=61.8181818181818, Blast_Score=426, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 36624; Mature: 36624

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERLVSGSALGGEAAFEPTLRPQYLHEYIGQDKVKENLQVFIEAAKLREETLDHVLLYG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEC
PPGLGKTTLAAIIANEMGVKMRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRTV
CCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHH
EEVLYPAMEDYCLDITVGKGPEARSLRLDLPPFTLVGATTRAGALSAPLRDRFGVISRLE
HHHHHHHHHCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
YYQVDQLAQIIERAAAILHIIINNEAALELARRARGTPRIANRLLRRVRDFAQVRGDGEI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
TLPLAVEALERLQVDRLGLDHIDHKLLLAIIEKFAGGPVGLETMAAVIGEEAQTIEEVYE
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHH
PYLLQIGLLQRTPRGRVATPAAYAHLGMEVPKR
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDERLVSGSALGGEAAFEPTLRPQYLHEYIGQDKVKENLQVFIEAAKLREETLDHVLLYG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEC
PPGLGKTTLAAIIANEMGVKMRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRTV
CCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHH
EEVLYPAMEDYCLDITVGKGPEARSLRLDLPPFTLVGATTRAGALSAPLRDRFGVISRLE
HHHHHHHHHCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
YYQVDQLAQIIERAAAILHIIINNEAALELARRARGTPRIANRLLRRVRDFAQVRGDGEI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
TLPLAVEALERLQVDRLGLDHIDHKLLLAIIEKFAGGPVGLETMAAVIGEEAQTIEEVYE
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHH
PYLLQIGLLQRTPRGRVATPAAYAHLGMEVPKR
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA