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The map label for this gene is cccA [H]

Identifier: 138896054

GI number: 138896054

Start: 2525869

End: 2526231

Strand: Reverse

Name: cccA [H]

Synonym: GTNG_2417

Alternate gene names: 138896054

Gene position: 2526231-2525869 (Counterclockwise)

Preceding gene: 138896055

Following gene: 138896053

Centisome position: 71.16

GC content: 51.52

Gene sequence:

>363_bases
ATGAACCGCAATCCGCTCATCCCGTTTTTCATCATTATGGCATTCGGGATTGTGCTGACGTTCGTCTTGTCGTTTAAAGG
GCTAGGCGATGCGAAAGAGATGGCCGAAGAGAAAAAAGGCGGCGAAAAAACAGAACAGACCGCCGAATTTAATCCGGAGG
ATTTTTACAAGCAAACATGCGCCAGCTGTCACGGACAAAATTATGAAGGCGGCATGGGTCCGGCATTAAAAGGAGTCGGC
GAACGTCTGTCGGCGGACCAACTGAAAGACGTCCTTCAAAACGGGCGCGGTGGCATGCCGGGCGGGCTTGTGCCGGCTGA
CAACATCGATGCGATGACGAAATGGTTGGCCGACTTAAAATAA

Upstream 100 bases:

>100_bases
GCTCCCGTTTTGGAAACTTAGGGCTTTTCCTTGTCCACTATTTACAGTACAATAAAATTGTTTGCATCGTTCTTCATCAT
ACATAAGGGAGGTAAAAAAG

Downstream 100 bases:

>100_bases
TGATGATTGACGTCCCTTTGCCTTTGGCGAAGGGATGTTTTATCATCTCCAACTACAAAGCTCCCGCTTCACATCGTGAG
TGTAGGTGGGAGTACAATAA

Product: membrane-attached cytochrome c550

Products: NA

Alternate protein names: Cytochrome c A [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MNRNPLIPFFIIMAFGIVLTFVLSFKGLGDAKEMAEEKKGGEKTEQTAEFNPEDFYKQTCASCHGQNYEGGMGPALKGVG
ERLSADQLKDVLQNGRGGMPGGLVPADNIDAMTKWLADLK

Sequences:

>Translated_120_residues
MNRNPLIPFFIIMAFGIVLTFVLSFKGLGDAKEMAEEKKGGEKTEQTAEFNPEDFYKQTCASCHGQNYEGGMGPALKGVG
ERLSADQLKDVLQNGRGGMPGGLVPADNIDAMTKWLADLK
>Mature_120_residues
MNRNPLIPFFIIMAFGIVLTFVLSFKGLGDAKEMAEEKKGGEKTEQTAEFNPEDFYKQTCASCHGQNYEGGMGPALKGVG
ERLSADQLKDVLQNGRGGMPGGLVPADNIDAMTKWLADLK

Specific function: Not essential for growth on minimal or rich media [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13014; Mature: 13014

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNPLIPFFIIMAFGIVLTFVLSFKGLGDAKEMAEEKKGGEKTEQTAEFNPEDFYKQTC
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH
ASCHGQNYEGGMGPALKGVGERLSADQLKDVLQNGRGGMPGGLVPADNIDAMTKWLADLK
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNRNPLIPFFIIMAFGIVLTFVLSFKGLGDAKEMAEEKKGGEKTEQTAEFNPEDFYKQTC
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH
ASCHGQNYEGGMGPALKGVGERLSADQLKDVLQNGRGGMPGGLVPADNIDAMTKWLADLK
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2166045; 8969508; 9384377; 8383048 [H]