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The map label for this gene is yqzC [H]

Identifier: 138896029

GI number: 138896029

Start: 2503077

End: 2503514

Strand: Direct

Name: yqzC [H]

Synonym: GTNG_2392

Alternate gene names: 138896029

Gene position: 2503077-2503514 (Clockwise)

Preceding gene: 138896028

Following gene: 138896038

Centisome position: 70.5

GC content: 54.11

Gene sequence:

>438_bases
ATGAGAAAGCGGACGATACGTTCTTTCGCCTTTGGCTTGCTTGTTTCGACGTCGATTATCGGCGCCGCATATTACACTTC
CCCTCCGCCTGAGTCGACCGATGTGGACGTCAAGGCGTACCTTCAACAACATGAGCTCGTCGCTGTTACAAAGGACGAAT
ACGACAAGCTCTTAAGCACCCAATCGAAGGCGTCGGTCGAGCAGCCGCCGAAACAATCGGTGCAAACCGTTTATGTGTAC
CGCCTTGTGATTGAAAAAGGGGATACGCCGGAAACGTTCGCCAAAGAGCTTGAGGCTGCCCACATCATCGACAGCGCTCG
CTCGTTCAATGACTATTTGCAGAAGCGTGGGCTGGCGCATTTGATCCGCCCCGGCGCCTACAATGTGCGCAGCGATATGG
ATTATGCGGCGATCAGCCGCCTCATTACCAGCCCATAA

Upstream 100 bases:

>100_bases
TCTTGCTTTTACATAAACAAGGGTTTCCTCTCGATGAGATCGCGCAAGAAACCGGCTTGACTGTTCCTGAAGTCGAGCGG
ACGATAAGGAGATTGCAGCG

Downstream 100 bases:

>100_bases
TTCAGCCAAAAGGAGGCGCCTACCAGGACGCCTCCTTACATTTATACTGTCAGTCATTCAAGTCGTAATGCTTCCCTTTG
ACAAGGTAAATGAGATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRKRTIRSFAFGLLVSTSIIGAAYYTSPPPESTDVDVKAYLQQHELVAVTKDEYDKLLSTQSKASVEQPPKQSVQTVYVY
RLVIEKGDTPETFAKELEAAHIIDSARSFNDYLQKRGLAHLIRPGAYNVRSDMDYAAISRLITSP

Sequences:

>Translated_145_residues
MRKRTIRSFAFGLLVSTSIIGAAYYTSPPPESTDVDVKAYLQQHELVAVTKDEYDKLLSTQSKASVEQPPKQSVQTVYVY
RLVIEKGDTPETFAKELEAAHIIDSARSFNDYLQKRGLAHLIRPGAYNVRSDMDYAAISRLITSP
>Mature_145_residues
MRKRTIRSFAFGLLVSTSIIGAAYYTSPPPESTDVDVKAYLQQHELVAVTKDEYDKLLSTQSKASVEQPPKQSVQTVYVY
RLVIEKGDTPETFAKELEAAHIIDSARSFNDYLQKRGLAHLIRPGAYNVRSDMDYAAISRLITSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 16257; Mature: 16257

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRTIRSFAFGLLVSTSIIGAAYYTSPPPESTDVDVKAYLQQHELVAVTKDEYDKLLST
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEECHHHHHHHHHH
QSKASVEQPPKQSVQTVYVYRLVIEKGDTPETFAKELEAAHIIDSARSFNDYLQKRGLAH
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LIRPGAYNVRSDMDYAAISRLITSP
HHCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRKRTIRSFAFGLLVSTSIIGAAYYTSPPPESTDVDVKAYLQQHELVAVTKDEYDKLLST
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEECHHHHHHHHHH
QSKASVEQPPKQSVQTVYVYRLVIEKGDTPETFAKELEAAHIIDSARSFNDYLQKRGLAH
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LIRPGAYNVRSDMDYAAISRLITSP
HHCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]