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The map label for this gene is 138896025

Identifier: 138896025

GI number: 138896025

Start: 2501038

End: 2501814

Strand: Reverse

Name: 138896025

Synonym: GTNG_2388

Alternate gene names: NA

Gene position: 2501814-2501038 (Counterclockwise)

Preceding gene: 138896026

Following gene: 138896024

Centisome position: 70.47

GC content: 59.85

Gene sequence:

>777_bases
GTGAGCCATGAATGGTGGTATGCGGCTGCCTCTGTCATCGCAGCTGGTGGCGGATGGCTATTGCGGTCGCTGTCTGTCTC
AGGGGCAGCGGCGACCGTTGTCGTCGGCACGCTGGTCGGATGCGGCTTTTCTTGGGGCGGATTATGGTTGTTAGGGCTCT
TTTTTGCCAGCTCCAGCTTCTTTAGCAACGCCGGGAAGAGGAAAAAAGCAAAGATGGCTGGAAAATTGGCCAAAGGTGGG
CGGCGTGATGCTGTCCAGGTGCTTGCCAACGGCGGAATGCCAGCTGTTTTGGCGCTGTTGGCGCTGTTACGTCCTGATCC
GGTATGGAATGAGCTGTTCGTTGTTGCCGTCGCAGCAGCGAACGCTGACACGTGGGCATCGGAAATCGGCGCCTTGAGCA
GACGGCCGCCGCGGGCATGGCCGAGCTTTCGGCCGGTGGAAGCTGGCACTTCGGGAGCGGTGACGCTCCTTGGCACGGTT
GCTTCCCTCGCTGGGGCGCTGTTCATCGCTGCTGCCGGTGCACATTTCCTGCATACTACGCCATTTTTAACGATTGCGCT
GTTCGGCTGGTTCGGCAGCTGGCTGGACACATGGCTTGGTGCCGCTTGGCAGTCCGCCTACCGCTGCCTAGTATGTGGGG
CAGCCACAGAACGGAAATGGCATTGTGGGCAAAGGACGATCCATGTGAAAGGATGGCGTTGGCTTGACAACGATGCAGTC
AACGCGTTGTCGATCATTGGCGCGGTGCTCGCCGCTGCGTTCGTGTTCGTGCGCTGA

Upstream 100 bases:

>100_bases
GCGGCGCTCGCCTATTCGTTTCAAGTGGTTGAAGACATTCCTGTCGAGGATCACGATGTGCCGGTCGAGTTTATGATTAC
TGATCAAGGGGTTATTCATT

Downstream 100 bases:

>100_bases
TGAATGCGCTTCATAATTAAGGAGAAAAAGGGAAAAAGAATAACGAACGTATCATATGATGAAGGGGGAGCACCAATGAA
CAAATGGGCGTATTCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSHEWWYAAASVIAAGGGWLLRSLSVSGAAATVVVGTLVGCGFSWGGLWLLGLFFASSSFFSNAGKRKKAKMAGKLAKGG
RRDAVQVLANGGMPAVLALLALLRPDPVWNELFVVAVAAANADTWASEIGALSRRPPRAWPSFRPVEAGTSGAVTLLGTV
ASLAGALFIAAAGAHFLHTTPFLTIALFGWFGSWLDTWLGAAWQSAYRCLVCGAATERKWHCGQRTIHVKGWRWLDNDAV
NALSIIGAVLAAAFVFVR

Sequences:

>Translated_258_residues
MSHEWWYAAASVIAAGGGWLLRSLSVSGAAATVVVGTLVGCGFSWGGLWLLGLFFASSSFFSNAGKRKKAKMAGKLAKGG
RRDAVQVLANGGMPAVLALLALLRPDPVWNELFVVAVAAANADTWASEIGALSRRPPRAWPSFRPVEAGTSGAVTLLGTV
ASLAGALFIAAAGAHFLHTTPFLTIALFGWFGSWLDTWLGAAWQSAYRCLVCGAATERKWHCGQRTIHVKGWRWLDNDAV
NALSIIGAVLAAAFVFVR
>Mature_257_residues
SHEWWYAAASVIAAGGGWLLRSLSVSGAAATVVVGTLVGCGFSWGGLWLLGLFFASSSFFSNAGKRKKAKMAGKLAKGGR
RDAVQVLANGGMPAVLALLALLRPDPVWNELFVVAVAAANADTWASEIGALSRRPPRAWPSFRPVEAGTSGAVTLLGTVA
SLAGALFIAAAGAHFLHTTPFLTIALFGWFGSWLDTWLGAAWQSAYRCLVCGAATERKWHCGQRTIHVKGWRWLDNDAVN
ALSIIGAVLAAAFVFVR

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=267, Percent_Identity=32.9588014981273, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 27228; Mature: 27097

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEWWYAAASVIAAGGGWLLRSLSVSGAAATVVVGTLVGCGFSWGGLWLLGLFFASSSF
CCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FSNAGKRKKAKMAGKLAKGGRRDAVQVLANGGMPAVLALLALLRPDPVWNELFVVAVAAA
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
NADTWASEIGALSRRPPRAWPSFRPVEAGTSGAVTLLGTVASLAGALFIAAAGAHFLHTT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PFLTIALFGWFGSWLDTWLGAAWQSAYRCLVCGAATERKWHCGQRTIHVKGWRWLDNDAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCEECCCHHH
NALSIIGAVLAAAFVFVR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHEWWYAAASVIAAGGGWLLRSLSVSGAAATVVVGTLVGCGFSWGGLWLLGLFFASSSF
CCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FSNAGKRKKAKMAGKLAKGGRRDAVQVLANGGMPAVLALLALLRPDPVWNELFVVAVAAA
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
NADTWASEIGALSRRPPRAWPSFRPVEAGTSGAVTLLGTVASLAGALFIAAAGAHFLHTT
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PFLTIALFGWFGSWLDTWLGAAWQSAYRCLVCGAATERKWHCGQRTIHVKGWRWLDNDAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCEECCCHHH
NALSIIGAVLAAAFVFVR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]