Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is cotJB [H]
Identifier: 138895817
GI number: 138895817
Start: 2302600
End: 2302860
Strand: Direct
Name: cotJB [H]
Synonym: GTNG_2176
Alternate gene names: 138895817
Gene position: 2302600-2302860 (Clockwise)
Preceding gene: 138895816
Following gene: 138895818
Centisome position: 64.86
GC content: 50.57
Gene sequence:
>261_bases ATGAAACAAATGCCAAAGGAGTATTACGAGCGTTTGGAGGAGCTGCAAGCGGTCGACTTTGCCCTCGTTGAGCTCACGCT TTATTTAGACACCCATCCAACCGACTACCAAGCGATTCAACAATTTAACCAACTCGCTCAAAAGCGGAGACAGTTGAAAA AACAGTTTGAAGCCGCCTACGGGCCGCTTGAGCAGTTTGGCCATAGCTATTCCAACTACCCGTGGAACTGGGACGACACG CCGTGGCCTTGGCAAGTGTAG
Upstream 100 bases:
>100_bases AATTCCCTCTGCGTGAAGCATTAATGAAAGGAACGCTTTGGAAAGTGTTTTACGACCCTTATTACAGCCCTTACGAAACA AAAACAAAAGGTGATGGCTC
Downstream 100 bases:
>100_bases CCGATACATCACGAGCGCAAGGAGGAATGGATGATGTGGATTTATGAAAAAAAATTGCAATACCCGGTCCGCGTCAGCAC GTGCAACCCGAGACTGGCAA
Product: CotJB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKQMPKEYYERLEELQAVDFALVELTLYLDTHPTDYQAIQQFNQLAQKRRQLKKQFEAAYGPLEQFGHSYSNYPWNWDDT PWPWQV
Sequences:
>Translated_86_residues MKQMPKEYYERLEELQAVDFALVELTLYLDTHPTDYQAIQQFNQLAQKRRQLKKQFEAAYGPLEQFGHSYSNYPWNWDDT PWPWQV >Mature_86_residues MKQMPKEYYERLEELQAVDFALVELTLYLDTHPTDYQAIQQFNQLAQKRRQLKKQFEAAYGPLEQFGHSYSNYPWNWDDT PWPWQV
Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016571 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10502; Mature: 10502
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMPKEYYERLEELQAVDFALVELTLYLDTHPTDYQAIQQFNQLAQKRRQLKKQFEAAY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GPLEQFGHSYSNYPWNWDDTPWPWQV CCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQMPKEYYERLEELQAVDFALVELTLYLDTHPTDYQAIQQFNQLAQKRRQLKKQFEAAY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GPLEQFGHSYSNYPWNWDDTPWPWQV CCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768848; 9384377 [H]