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The map label for this gene is yjdF [H]

Identifier: 138895310

GI number: 138895310

Start: 1746207

End: 1746839

Strand: Direct

Name: yjdF [H]

Synonym: GTNG_1654

Alternate gene names: 138895310

Gene position: 1746207-1746839 (Clockwise)

Preceding gene: 138895308

Following gene: 138895312

Centisome position: 49.18

GC content: 48.97

Gene sequence:

>633_bases
GTGGAACAGGCAAAACAACCCCGCGTTCATGGGCTGTTGTTGCTAGTCGTTGCCGCTGTGTTCGTTTGGTCGGCCATTCG
TCCGACTAGCTATGCAGTGTGGGCGCTCGAGGTCACCCCGGCGCTGATTGGGCTTATGATTGTAATCGCCCTATACCGAC
GCTTTCGGTTGACCACGATGTCATATGTCATCATTGCTATATTGGTGATCATCATGTTTATTGGCGGTCATTATATTTAT
TCCAAAGTTCCCTTTTTTAACTGGATCAAAGATGTATTTCATTTGGAACGCAACCATTACGACCGATTTGGCCATTTCCT
CAAAGGGATGTTCGCTATCGTTCTCAGAGAGCTCCTCCTGCGGAAAACGCCGTTGCCGCGCGGCGCGTGGCTTTTCATCA
TCGTCACGGGCATGTCGCTCGCTATCGCTGCCCTGTATGAGATCATCGAATGGCTCGTCTCGATCATCTTTAAAGGTGGA
AAGGCATCAAAGGACTTTTTGGGGATGCAAGGAAATATTTGGGATACACAATGGGATATGTTATGTACACTCATCGGGAC
AATGATTGCTCTATGGCTGCTCTCAAAGTGGCATGACAGGCAGCTTGCGCGATTGGATCATCACCGCAGCTAA

Upstream 100 bases:

>100_bases
TTGGTGTAGTTCTTCTTCGTGTGAAAATGCTTCGTATAAAATCGGCGATTTTCCGAATAATGACAGTAGACTCATCTTGC
TCTGCCAAGGAGGAAAACAA

Downstream 100 bases:

>100_bases
GCTCATAAAACAGCGGCTTTTGCCTTCAGGAAAAGCCGCTGTTTTCAATTCACCTTATACAAGTAAATCGTCCATGCTGA
TTCGTCGGAAGTAAACACAC

Product: sodium-glucose/galactose transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEQAKQPRVHGLLLLVVAAVFVWSAIRPTSYAVWALEVTPALIGLMIVIALYRRFRLTTMSYVIIAILVIIMFIGGHYIY
SKVPFFNWIKDVFHLERNHYDRFGHFLKGMFAIVLRELLLRKTPLPRGAWLFIIVTGMSLAIAALYEIIEWLVSIIFKGG
KASKDFLGMQGNIWDTQWDMLCTLIGTMIALWLLSKWHDRQLARLDHHRS

Sequences:

>Translated_210_residues
MEQAKQPRVHGLLLLVVAAVFVWSAIRPTSYAVWALEVTPALIGLMIVIALYRRFRLTTMSYVIIAILVIIMFIGGHYIY
SKVPFFNWIKDVFHLERNHYDRFGHFLKGMFAIVLRELLLRKTPLPRGAWLFIIVTGMSLAIAALYEIIEWLVSIIFKGG
KASKDFLGMQGNIWDTQWDMLCTLIGTMIALWLLSKWHDRQLARLDHHRS
>Mature_210_residues
MEQAKQPRVHGLLLLVVAAVFVWSAIRPTSYAVWALEVTPALIGLMIVIALYRRFRLTTMSYVIIAILVIIMFIGGHYIY
SKVPFFNWIKDVFHLERNHYDRFGHFLKGMFAIVLRELLLRKTPLPRGAWLFIIVTGMSLAIAALYEIIEWLVSIIFKGG
KASKDFLGMQGNIWDTQWDMLCTLIGTMIALWLLSKWHDRQLARLDHHRS

Specific function: Unknown

COG id: COG3647

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790562, Length=205, Percent_Identity=35.609756097561, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014509 [H]

Pfam domain/function: PF09997 DUF2238 [H]

EC number: NA

Molecular weight: Translated: 24329; Mature: 24329

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAKQPRVHGLLLLVVAAVFVWSAIRPTSYAVWALEVTPALIGLMIVIALYRRFRLTTM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVIIAILVIIMFIGGHYIYSKVPFFNWIKDVFHLERNHYDRFGHFLKGMFAIVLRELLL
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTPLPRGAWLFIIVTGMSLAIAALYEIIEWLVSIIFKGGKASKDFLGMQGNIWDTQWDM
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHH
LCTLIGTMIALWLLSKWHDRQLARLDHHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQAKQPRVHGLLLLVVAAVFVWSAIRPTSYAVWALEVTPALIGLMIVIALYRRFRLTTM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVIIAILVIIMFIGGHYIYSKVPFFNWIKDVFHLERNHYDRFGHFLKGMFAIVLRELLL
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTPLPRGAWLFIIVTGMSLAIAALYEIIEWLVSIIFKGGKASKDFLGMQGNIWDTQWDM
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHH
LCTLIGTMIALWLLSKWHDRQLARLDHHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2656658 [H]