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The map label for this gene is csoR [H]

Identifier: 138895272

GI number: 138895272

Start: 1700102

End: 1700428

Strand: Direct

Name: csoR [H]

Synonym: GTNG_1614

Alternate gene names: 138895272

Gene position: 1700102-1700428 (Clockwise)

Preceding gene: 138895271

Following gene: 138895273

Centisome position: 47.89

GC content: 41.59

Gene sequence:

>327_bases
GTGATAACAGTGAATTCAAATCAATATCAAGATAACAATATAAATGCCAAAATGGTTCCGCGAACCGAAGAAGAGATCGA
AAGCATCGTCAAGCGCTTGAAGCGTATTGAAGGACAAGTACGCGGAGTGCAAAAGATGGTCGAGGACAATCGGTACTGTA
TTGATATTTTAGTGCAAATTTCCGCGATTCAAGCCGCGTTAAATAAAGTCGGGGTGAACTTGCTGGAACGTCATGTCAAT
CATTGTGTTGCTAAGGCGATTCGCGAAGGAAGCGGAGAAGAATCCATTCGGGAATTAATGGATGTCATTAAGCAATTCTC
AAAGTAA

Upstream 100 bases:

>100_bases
TAACACTATCCTTTAAAGAAATATATTTTTTACCGCCAATCATATCAATTGTATCTTATACCCATTACGGGTATAATGTA
TTTAAAAGATGGTTATTGAG

Downstream 100 bases:

>100_bases
GGGAGAGAAAGATGGATGAGTGAACCAAGAACCGTGACACTGAAGGTAACCGGCATGACATGTGCCGCTTGTTCCAATCG
TATTGAGAAAGTGTTGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MITVNSNQYQDNNINAKMVPRTEEEIESIVKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALNKVGVNLLERHVN
HCVAKAIREGSGEESIRELMDVIKQFSK

Sequences:

>Translated_108_residues
MITVNSNQYQDNNINAKMVPRTEEEIESIVKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALNKVGVNLLERHVN
HCVAKAIREGSGEESIRELMDVIKQFSK
>Mature_108_residues
MITVNSNQYQDNNINAKMVPRTEEEIESIVKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALNKVGVNLLERHVN
HCVAKAIREGSGEESIRELMDVIKQFSK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12336; Mature: 12336

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNSNQYQDNNINAKMVPRTEEEIESIVKRLKRIEGQVRGVQKMVEDNRYCIDILVQI
CCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SAIQAALNKVGVNLLERHVNHCVAKAIREGSGEESIRELMDVIKQFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITVNSNQYQDNNINAKMVPRTEEEIESIVKRLKRIEGQVRGVQKMVEDNRYCIDILVQI
CCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SAIQAALNKVGVNLLERHVNHCVAKAIREGSGEESIRELMDVIKQFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]