| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138895078
Identifier: 138895078
GI number: 138895078
Start: 1506857
End: 1507417
Strand: Reverse
Name: 138895078
Synonym: GTNG_1416
Alternate gene names: NA
Gene position: 1507417-1506857 (Counterclockwise)
Preceding gene: 138895084
Following gene: 138895075
Centisome position: 42.46
GC content: 52.94
Gene sequence:
>561_bases ATGCTAACGATCGTGCCGATTTTATTAGCCGTCTATGTATGCTATAAAGTGTTCGCTGTTTTGGACGGGTTGCTCGGCCA GTATGTCCGGCCGTATTTGGATGGCCGCTACATCCCCGGCCTTGGCTTGCTCGCAACAGTGGTGCTCATCACTGTTTGCG GCTGGCTATCGACGCAATATGTGAGCGGCCGTCTCATTCGGCTTGTCGATCGGTTGCTTGAAAGCATTCCCTTGATGAAG ACCGTTTATTCGGTCGCTAAAGATACGATTGCTTCTTTTGTCGGAGAAAAACGGTCGTTTTCGCAAGTCGTGCTCGTCAC AATGCCGGGGAGCGGCTGGAAATGCCTTGGCTTCATTACGATGGACAATGTCGGCGCCTGGCACGATCCGCTTGCTGATT ATGTCGCCGTCTATATTCCACAGACGTTTCAAGTCGCCGGGCTTACCCTTCTCGTCCCGAAAGAGCAAGTCGAAGTCATC GATATCTCGCCGGAAGAGGCAATGAAGTTTATCCTCTCCGGCGGCGTCGCGGTCCGCAAACAAAAACGGCTGCCCCAATG A
Upstream 100 bases:
>100_bases ATTAATGGTTGTGCAAATCGAAAAAAATTGGTATGTTGATAGAAGGTAAAGGAACGGGAGGAGAACAGATGCGCTTTTTT GTGAAAATTTTGTAAACGGC
Downstream 100 bases:
>100_bases TAGGGCAGCCGTTCATATTTCCGACCAACATACGTTCTTGCCAACTCAAATATGTCCTGACCGTTAAAAATATCGTTTTT TCCAAAAGATGTATGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; S Membrane Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLTIVPILLAVYVCYKVFAVLDGLLGQYVRPYLDGRYIPGLGLLATVVLITVCGWLSTQYVSGRLIRLVDRLLESIPLMK TVYSVAKDTIASFVGEKRSFSQVVLVTMPGSGWKCLGFITMDNVGAWHDPLADYVAVYIPQTFQVAGLTLLVPKEQVEVI DISPEEAMKFILSGGVAVRKQKRLPQ
Sequences:
>Translated_186_residues MLTIVPILLAVYVCYKVFAVLDGLLGQYVRPYLDGRYIPGLGLLATVVLITVCGWLSTQYVSGRLIRLVDRLLESIPLMK TVYSVAKDTIASFVGEKRSFSQVVLVTMPGSGWKCLGFITMDNVGAWHDPLADYVAVYIPQTFQVAGLTLLVPKEQVEVI DISPEEAMKFILSGGVAVRKQKRLPQ >Mature_186_residues MLTIVPILLAVYVCYKVFAVLDGLLGQYVRPYLDGRYIPGLGLLATVVLITVCGWLSTQYVSGRLIRLVDRLLESIPLMK TVYSVAKDTIASFVGEKRSFSQVVLVTMPGSGWKCLGFITMDNVGAWHDPLADYVAVYIPQTFQVAGLTLLVPKEQVEVI DISPEEAMKFILSGGVAVRKQKRLPQ
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20524; Mature: 20524
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIVPILLAVYVCYKVFAVLDGLLGQYVRPYLDGRYIPGLGLLATVVLITVCGWLSTQY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VSGRLIRLVDRLLESIPLMKTVYSVAKDTIASFVGEKRSFSQVVLVTMPGSGWKCLGFIT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE MDNVGAWHDPLADYVAVYIPQTFQVAGLTLLVPKEQVEVIDISPEEAMKFILSGGVAVRK ECCCCCCHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEEEECCHHHHHHHHHHCCHHHHH QKRLPQ HHCCCC >Mature Secondary Structure MLTIVPILLAVYVCYKVFAVLDGLLGQYVRPYLDGRYIPGLGLLATVVLITVCGWLSTQY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VSGRLIRLVDRLLESIPLMKTVYSVAKDTIASFVGEKRSFSQVVLVTMPGSGWKCLGFIT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE MDNVGAWHDPLADYVAVYIPQTFQVAGLTLLVPKEQVEVIDISPEEAMKFILSGGVAVRK ECCCCCCHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEEEECCHHHHHHHHHHCCHHHHH QKRLPQ HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA