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The map label for this gene is yuxO [H]

Identifier: 138895074

GI number: 138895074

Start: 1504498

End: 1504905

Strand: Direct

Name: yuxO [H]

Synonym: GTNG_1412

Alternate gene names: 138895074

Gene position: 1504498-1504905 (Clockwise)

Preceding gene: 138895073

Following gene: 138895076

Centisome position: 42.38

GC content: 55.64

Gene sequence:

>408_bases
ATGATCGATTTGACAGTGATGAAAGAAATGGCGAAACATACGCTAATTGACACACTTGGCATCGAAATTGTCGAACTTGG
TGAAGGACGCGTCGTGGCGACGATGCCAGTCGACCAGCGCACGCACCAGCCAGCTGGAATCTTGCATGGTGGGGCCTCAG
TCGCGTTGGCTGAAACGGTGGCGAGCATCGGCGCGTACGCGCTTGTGGATCCGCAAACGGAAAACGTCGTTGGTTTAGAA
ATTAATGCAAACCATGTTCGCGCTGTTCGCAGCGGAACGGTGACGGCAACGGGAACAGTGCTGCACCGCGGCCGAACGAC
GATGGTGTGGGATGTACGCATCACGGATGAACAAGGGCAGCTCGTCTGCGTCTCCCGCTGCACGATCGCCATCATTCGAA
AAAGCTAG

Upstream 100 bases:

>100_bases
CGCACTTTGATTTGCTCGGAGAGACGCAAGCGCGCATTTTGCGGCAAGAAGGGCGGCTTGATGAGCTGGCACGGTTTACG
AAACGGGGGAGGAAGGAATC

Downstream 100 bases:

>100_bases
CGCTAAGGCTAGCTTTTTCACTGTTTATTGGATCAGAAATACCGGTTCATCACCTTTTTCGTCTAAATCGATCGTCAAAT
CGTGCCCGTCAAAATACCAT

Product: ComA operon protein 2

Products: NA

Alternate protein names: ComA operon protein 2 [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIDLTVMKEMAKHTLIDTLGIEIVELGEGRVVATMPVDQRTHQPAGILHGGASVALAETVASIGAYALVDPQTENVVGLE
INANHVRAVRSGTVTATGTVLHRGRTTMVWDVRITDEQGQLVCVSRCTIAIIRKS

Sequences:

>Translated_135_residues
MIDLTVMKEMAKHTLIDTLGIEIVELGEGRVVATMPVDQRTHQPAGILHGGASVALAETVASIGAYALVDPQTENVVGLE
INANHVRAVRSGTVTATGTVLHRGRTTMVWDVRITDEQGQLVCVSRCTIAIIRKS
>Mature_135_residues
MIDLTVMKEMAKHTLIDTLGIEIVELGEGRVVATMPVDQRTHQPAGILHGGASVALAETVASIGAYALVDPQTENVVGLE
INANHVRAVRSGTVTATGTVLHRGRTTMVWDVRITDEQGQLVCVSRCTIAIIRKS

Specific function: Is not required for competence [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=131, Percent_Identity=45.8015267175573, Blast_Score=117, Evalue=2e-28,
Organism=Escherichia coli, GI1786813, Length=132, Percent_Identity=41.6666666666667, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14425; Mature: 14425

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLTVMKEMAKHTLIDTLGIEIVELGEGRVVATMPVDQRTHQPAGILHGGASVALAETV
CCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHH
ASIGAYALVDPQTENVVGLEINANHVRAVRSGTVTATGTVLHRGRTTMVWDVRITDEQGQ
HHCCEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEEEEECCCEEEEEEEEEECCCCC
LVCVSRCTIAIIRKS
EEEEECCEEEEEECC
>Mature Secondary Structure
MIDLTVMKEMAKHTLIDTLGIEIVELGEGRVVATMPVDQRTHQPAGILHGGASVALAETV
CCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHH
ASIGAYALVDPQTENVVGLEINANHVRAVRSGTVTATGTVLHRGRTTMVWDVRITDEQGQ
HHCCEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEEEEECCCEEEEEEEEEECCCCC
LVCVSRCTIAIIRKS
EEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377 [H]