| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is glcB [H]
Identifier: 138895046
GI number: 138895046
Start: 1469491
End: 1471674
Strand: Direct
Name: glcB [H]
Synonym: GTNG_1384
Alternate gene names: 138895046
Gene position: 1469491-1471674 (Clockwise)
Preceding gene: 138895045
Following gene: 138895047
Centisome position: 41.39
GC content: 52.06
Gene sequence:
>2184_bases ATGATTGAGTATGTGCAAGCGGGGACAATTCAAGTCGCGAAAGTGTTGTATGAGTTTGTCAATGAGGAGCTGTTGCCGAA CAGCGGACTTGACCAAGACAAGTTTTGGAGCGATTTTGCCGCGCTGATCGCCGATTTGACGCCGCGCAATAAAGAGTTGC TTGCGCGTCGCGACGAGATTCAGGAGAAATTGAATGAGTGGTATAAAGAACACCGCGGCCGCTTTGATTTTCATGAATAT AAAGCGTTTTTAACGGACATCGGCTATTTGGAGCCAGAAGTGGAGGATTTTGAGATTACGACTGACAATGTCGATGAAGA AATTGCCGTGCAAGCAGGGCCGCAGCTCGTCGTTCCGCTGACGAACGCCCGCTACGCGTTAAACGCTGCCAACGCCCGTT GGGGCAGCTTGTATGATGCGCTGTATGGCACGGACGCCATTAGTGAAGAAGACGGCGCCGAGCGCGGTTCGTCGTACAAC CCGGTGCGCGGAGCGAAAGTCATTGCATACGGGCGGCAATTTTTAGATGAAGCAGTACCGCTTGTGGAACACTCCCATAA GGATGCTGTCCAATACGCCATTGTTGATGGGAAGCTTGTCGTGACGACAGAAGGAGGGGCGACGACAGGGCTGAAAGAGC CGGAAAAACTTATCGGCTTCCAAGGCGAGCCGCAAAACCCGACGGCGGTGTTGCTGAAAAACAACGGCCTTCATATTGAA ATTCAAATCGACCGTGAACATCCAGTCGGCAAAACAGATAAAGCCGGCATCAAAGACATCGTCTTAGAAGCGGCCGTGAC GACGATTATGGACGGCGAAGATTCGGTCGCAGCTGTCGACGCAGAGGACAAAGTGGTCGTGTATCGCAACTTGTTCGGGT TGATTAAAGGCGATTTGACGGCGACGTTTGAGAAAAACGGGAAACGGCTGACGCGCACCTTGAATCCGGATCGTGAGTAC AAAACGCCAGATGGCGGGGAGCTTGTGCTGCCGGGTCGTTCGCTCATGTTCGTGCGCAACGTCGGCCATTTGATGACAAA CAACGCTATTTTGGATGCGAACGGCGAAGAAGTGTATGAAGGAATCATCGATGCGGTAGTTACGAGCTTAATCATGAAAC ATTCACTCATCGGCAACACGCGCTACTTGAACTCGCGCAAAGGCTCGATTTACATCGTCAAGCCGAAAATGCACGGATCG GCAGAAGTGGCATTTGCCAATGAGCTGTTTGACCGTGTCGAGGATATGCTCGGCCTTGAGCGGAATACGATTAAAATTGG TGTTATGGATGAAGAACGGCGGACATCGCTCAATTTGAAAAACTGCATTTACGAAGTGCGCGACCGCATCGTCTTCATTA ATACCGGCTTCCTCGACCGGACTGGAGATGAGATTCATACATCGATGGAAGCAGGACCGATGCGGCGCAAAAACGATATG AAGTCGTCGACATGGCTGGCCGGCTATGAAAAATCGAACGTGGCGGTCGGGCTCGCAGCCGGATTCCGCGGCCGGGCACA AATCGGTAAAGGGATGTGGGCGATGCCGGACTTGATGGCGGAAATGCTGAAACAAAAAGGTGCGCAATTAAAAGCCGGCG CGAACACCGCATGGGTACCGTCTCCGACTGCTGCTACGCTCCATGCGCTCCATTATCATCAGGTGAACGTTGCTGCCGTA CAAAATGAGCTGGCCAATGATCGGAATGATTATCGCGACGACATTTTGCAAATTCCGGTTGTCGACAACCCGCAATGGAC GGCGGACGAAATTCAAGAAGAGCTCGACAACAACTGCCAAAGCATTTTAGGTTATGTTGTCCGTTGGATTGACCAAGGGA TCGGCTGCTCGAAAGTGCCGGACATCCACAACATCGGATTGATGGAAGACCGGGCCACGCTCCGCATTTCGAGTCAAATT CTCGCCAACTGGCTTCACCACGGTATTTGCACGAAAGAGCAAGTGTTGGAGACGTTCAAACGGATGGCGAAAGTCGTCGA CGAACAAAACGCCGGCGATCCGAACTACCGCCCGATGGCGCCAAACTACGACGATTCAGTGGCGTTCCAAGCGGCATGCG ATCTCGTGTTCCTCGGCTATGAACAGCCAAATGGTTATACGGAGCCGATTTTGCATCGTCGCCGCCAAGAAGCAAAAGCA AAATTTGCTGCCGTTCAACAGTAA
Upstream 100 bases:
>100_bases ACAAAAACGATTGTCAGCGGTTTCGTTTCATGATATCATCTTTTTAGATTAATTTAGAAACAGTGTTTCGTAATAAGAAA CAAGAAAGGAGAAAGAAACG
Downstream 100 bases:
>100_bases GCGATCCATTGCAAATGAACAAGGGCCGAGCGCCCTTGTTCATTCCTACTCTTATTGATTAGAAAATTCAAAAAATAATA GAAAGGGGGCAGCTCCTAGT
Product: malate synthase G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MIEYVQAGTIQVAKVLYEFVNEELLPNSGLDQDKFWSDFAALIADLTPRNKELLARRDEIQEKLNEWYKEHRGRFDFHEY KAFLTDIGYLEPEVEDFEITTDNVDEEIAVQAGPQLVVPLTNARYALNAANARWGSLYDALYGTDAISEEDGAERGSSYN PVRGAKVIAYGRQFLDEAVPLVEHSHKDAVQYAIVDGKLVVTTEGGATTGLKEPEKLIGFQGEPQNPTAVLLKNNGLHIE IQIDREHPVGKTDKAGIKDIVLEAAVTTIMDGEDSVAAVDAEDKVVVYRNLFGLIKGDLTATFEKNGKRLTRTLNPDREY KTPDGGELVLPGRSLMFVRNVGHLMTNNAILDANGEEVYEGIIDAVVTSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGS AEVAFANELFDRVEDMLGLERNTIKIGVMDEERRTSLNLKNCIYEVRDRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM KSSTWLAGYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVPSPTAATLHALHYHQVNVAAV QNELANDRNDYRDDILQIPVVDNPQWTADEIQEELDNNCQSILGYVVRWIDQGIGCSKVPDIHNIGLMEDRATLRISSQI LANWLHHGICTKEQVLETFKRMAKVVDEQNAGDPNYRPMAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA KFAAVQQ
Sequences:
>Translated_727_residues MIEYVQAGTIQVAKVLYEFVNEELLPNSGLDQDKFWSDFAALIADLTPRNKELLARRDEIQEKLNEWYKEHRGRFDFHEY KAFLTDIGYLEPEVEDFEITTDNVDEEIAVQAGPQLVVPLTNARYALNAANARWGSLYDALYGTDAISEEDGAERGSSYN PVRGAKVIAYGRQFLDEAVPLVEHSHKDAVQYAIVDGKLVVTTEGGATTGLKEPEKLIGFQGEPQNPTAVLLKNNGLHIE IQIDREHPVGKTDKAGIKDIVLEAAVTTIMDGEDSVAAVDAEDKVVVYRNLFGLIKGDLTATFEKNGKRLTRTLNPDREY KTPDGGELVLPGRSLMFVRNVGHLMTNNAILDANGEEVYEGIIDAVVTSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGS AEVAFANELFDRVEDMLGLERNTIKIGVMDEERRTSLNLKNCIYEVRDRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM KSSTWLAGYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVPSPTAATLHALHYHQVNVAAV QNELANDRNDYRDDILQIPVVDNPQWTADEIQEELDNNCQSILGYVVRWIDQGIGCSKVPDIHNIGLMEDRATLRISSQI LANWLHHGICTKEQVLETFKRMAKVVDEQNAGDPNYRPMAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA KFAAVQQ >Mature_727_residues MIEYVQAGTIQVAKVLYEFVNEELLPNSGLDQDKFWSDFAALIADLTPRNKELLARRDEIQEKLNEWYKEHRGRFDFHEY KAFLTDIGYLEPEVEDFEITTDNVDEEIAVQAGPQLVVPLTNARYALNAANARWGSLYDALYGTDAISEEDGAERGSSYN PVRGAKVIAYGRQFLDEAVPLVEHSHKDAVQYAIVDGKLVVTTEGGATTGLKEPEKLIGFQGEPQNPTAVLLKNNGLHIE IQIDREHPVGKTDKAGIKDIVLEAAVTTIMDGEDSVAAVDAEDKVVVYRNLFGLIKGDLTATFEKNGKRLTRTLNPDREY KTPDGGELVLPGRSLMFVRNVGHLMTNNAILDANGEEVYEGIIDAVVTSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGS AEVAFANELFDRVEDMLGLERNTIKIGVMDEERRTSLNLKNCIYEVRDRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM KSSTWLAGYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVPSPTAATLHALHYHQVNVAAV QNELANDRNDYRDDILQIPVVDNPQWTADEIQEELDNNCQSILGYVVRWIDQGIGCSKVPDIHNIGLMEDRATLRISSQI LANWLHHGICTKEQVLETFKRMAKVVDEQNAGDPNYRPMAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA KFAAVQQ
Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]
COG id: COG2225
COG function: function code C; Malate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malate synthase family. GlcB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789348, Length=725, Percent_Identity=58.4827586206897, Blast_Score=884, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011076 - InterPro: IPR001465 - InterPro: IPR006253 [H]
Pfam domain/function: PF01274 Malate_synthase [H]
EC number: =2.3.3.9 [H]
Molecular weight: Translated: 81201; Mature: 81201
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEYVQAGTIQVAKVLYEFVNEELLPNSGLDQDKFWSDFAALIADLTPRNKELLARRDEI CCCEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QEKLNEWYKEHRGRFDFHEYKAFLTDIGYLEPEVEDFEITTDNVDEEIAVQAGPQLVVPL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHEEECCCEEEEEE TNARYALNAANARWGSLYDALYGTDAISEEDGAERGSSYNPVRGAKVIAYGRQFLDEAVP CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LVEHSHKDAVQYAIVDGKLVVTTEGGATTGLKEPEKLIGFQGEPQNPTAVLLKNNGLHIE HHHCCCCHHEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCEEEE IQIDREHPVGKTDKAGIKDIVLEAAVTTIMDGEDSVAAVDAEDKVVVYRNLFGLIKGDLT EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHCCEE ATFEKNGKRLTRTLNPDREYKTPDGGELVLPGRSLMFVRNVGHLMTNNAILDANGEEVYE EEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHCCCEEEECCHHHHHH GIIDAVVTSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGSAEVAFANELFDRVEDMLGLE HHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RNTIKIGVMDEERRTSLNLKNCIYEVRDRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM CCEEEEEEECCHHHHCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC KSSTWLAGYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVP CCCCEEECCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCC SPTAATLHALHYHQVNVAAVQNELANDRNDYRDDILQIPVVDNPQWTADEIQEELDNNCQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCHHHHHHHHHHHHH SILGYVVRWIDQGIGCSKVPDIHNIGLMEDRATLRISSQILANWLHHGICTKEQVLETFK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RMAKVVDEQNAGDPNYRPMAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHH KFAAVQQ HHHHCCC >Mature Secondary Structure MIEYVQAGTIQVAKVLYEFVNEELLPNSGLDQDKFWSDFAALIADLTPRNKELLARRDEI CCCEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QEKLNEWYKEHRGRFDFHEYKAFLTDIGYLEPEVEDFEITTDNVDEEIAVQAGPQLVVPL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHEEECCCEEEEEE TNARYALNAANARWGSLYDALYGTDAISEEDGAERGSSYNPVRGAKVIAYGRQFLDEAVP CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH LVEHSHKDAVQYAIVDGKLVVTTEGGATTGLKEPEKLIGFQGEPQNPTAVLLKNNGLHIE HHHCCCCHHEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCEEEE IQIDREHPVGKTDKAGIKDIVLEAAVTTIMDGEDSVAAVDAEDKVVVYRNLFGLIKGDLT EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHCCEE ATFEKNGKRLTRTLNPDREYKTPDGGELVLPGRSLMFVRNVGHLMTNNAILDANGEEVYE EEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHCCCEEEECCHHHHHH GIIDAVVTSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGSAEVAFANELFDRVEDMLGLE HHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RNTIKIGVMDEERRTSLNLKNCIYEVRDRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM CCEEEEEEECCHHHHCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC KSSTWLAGYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVP CCCCEEECCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCC SPTAATLHALHYHQVNVAAVQNELANDRNDYRDDILQIPVVDNPQWTADEIQEELDNNCQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCHHHHHHHHHHHHH SILGYVVRWIDQGIGCSKVPDIHNIGLMEDRATLRISSQILANWLHHGICTKEQVLETFK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RMAKVVDEQNAGDPNYRPMAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHH KFAAVQQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA