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The map label for this gene is 138895040

Identifier: 138895040

GI number: 138895040

Start: 1462741

End: 1463328

Strand: Direct

Name: 138895040

Synonym: GTNG_1378

Alternate gene names: NA

Gene position: 1462741-1463328 (Clockwise)

Preceding gene: 138895037

Following gene: 138895041

Centisome position: 41.2

GC content: 45.24

Gene sequence:

>588_bases
ATGAATGGATTTGCCAAGCGGACGGAACAAAAAAAACAGGCGATCAAGCAAACGGTGTTGGAGTTGCTGCGGACGAGCGA
TCCACGCGGGATGACGATCCAAATGATCGCCAAGCAGGCTAACGTGTCGCCAGTGACGATTTACAATTATTTCGGGAGCA
AGGAACATCTTGTCCGCGAAACGCTTATCGATTATATGATCCGCCAGGTGGAAGAATACGAAGCCTTTTTAAAAGAAGAC
CGCTCATTTGCAGAAAAAGTGAAATATATCATTTTTCAAAAGAAAAAAGTGTTGGGAGAAATCCAAGTTGACTTCATTCA
TCGCCTTATAAAGGAGGATGATGAATTTCGCCGTTCGGTCGATGTGCTTTACGAAACGAGGGTGCTGCCGCTGGTGATCG
AAATGATTCGCGAAGCCCAAGAAAATGGAGAGATTGCCCCGTACTTATCCATTGATACGCTGCTTTTGTATTTGAATTTA
TGGCGCGACGTGTCAGAGAAAATCCCTGTTTCTTTGTACAGCGAACGGCTGATTGATGAGCTGCTGCTTCTGTTTTTTTA
CGGTGTGAAAGGAGAACAGGAGCGGTGA

Upstream 100 bases:

>100_bases
TAAGTGTTTATCAATTAATTTTGTAATTTTTTATTTCTATTTTATTAAAATTAAGGGTAGAATGAAAATAAAAGAAAAGC
GAGACGGAAGGTGGTTTTTG

Downstream 100 bases:

>100_bases
AAAGCAGGAATTGACGGAAAGGGAGGCGAATAAGGGAGAAAAATGGGGGGAGGAGTATGATGAAATTTGCCGTCAATGTA
TCAACGATTTTTACGGAAGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNGFAKRTEQKKQAIKQTVLELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRETLIDYMIRQVEEYEAFLKED
RSFAEKVKYIIFQKKKVLGEIQVDFIHRLIKEDDEFRRSVDVLYETRVLPLVIEMIREAQENGEIAPYLSIDTLLLYLNL
WRDVSEKIPVSLYSERLIDELLLLFFYGVKGEQER

Sequences:

>Translated_195_residues
MNGFAKRTEQKKQAIKQTVLELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRETLIDYMIRQVEEYEAFLKED
RSFAEKVKYIIFQKKKVLGEIQVDFIHRLIKEDDEFRRSVDVLYETRVLPLVIEMIREAQENGEIAPYLSIDTLLLYLNL
WRDVSEKIPVSLYSERLIDELLLLFFYGVKGEQER
>Mature_195_residues
MNGFAKRTEQKKQAIKQTVLELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRETLIDYMIRQVEEYEAFLKED
RSFAEKVKYIIFQKKKVLGEIQVDFIHRLIKEDDEFRRSVDVLYETRVLPLVIEMIREAQENGEIAPYLSIDTLLLYLNL
WRDVSEKIPVSLYSERLIDELLLLFFYGVKGEQER

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23103; Mature: 23103

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFAKRTEQKKQAIKQTVLELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHH
TLIDYMIRQVEEYEAFLKEDRSFAEKVKYIIFQKKKVLGEIQVDFIHRLIKEDDEFRRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DVLYETRVLPLVIEMIREAQENGEIAPYLSIDTLLLYLNLWRDVSEKIPVSLYSERLIDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LLLLFFYGVKGEQER
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MNGFAKRTEQKKQAIKQTVLELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHH
TLIDYMIRQVEEYEAFLKEDRSFAEKVKYIIFQKKKVLGEIQVDFIHRLIKEDDEFRRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DVLYETRVLPLVIEMIREAQENGEIAPYLSIDTLLLYLNLWRDVSEKIPVSLYSERLIDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LLLLFFYGVKGEQER
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA