Click here to switch to the map view.

The map label for this gene is sspH1

Identifier: 138895027

GI number: 138895027

Start: 1452247

End: 1452426

Strand: Direct

Name: sspH1

Synonym: GTNG_1365

Alternate gene names: 138895027

Gene position: 1452247-1452426 (Clockwise)

Preceding gene: 138895026

Following gene: 138895028

Centisome position: 40.9

GC content: 53.89

Gene sequence:

>180_bases
ATGGAGACGCTGAGGGCGAAACGGATTGCCGAGGCTGGGGAGGTCGTCCCGGTGATGTATGAAGGAAAATCGGTGATCAT
TCAACATGTCGATGAAGAGCAAGAAATGGCGCGCATTTATTTCGTCGATGAACCGGAACGCGAGCAAGATGTGCCGGTGC
GTCTGCTCGAGGAACGATAG

Upstream 100 bases:

>100_bases
GGGACAAAGGAGAACTGCGTGAGCTCGTCTGCAGTGATGAGTTGTTTTGGAAAAGCTTGCGAACGCAGGCAAAAAATAGT
GCAAAAGGGGGCGAATAGGA

Downstream 100 bases:

>100_bases
GCGATGGGCAAGTCGTCGCTGTTTTGTCAAGGGAAAGCCGATGACACGTCTTGTTCTGGTATGATATAATGATTGAAAAA
ATGACGTTTGAACATTGGAG

Product: small acid soluble spore protein

Products: NA

Alternate protein names: SASP H 1

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
METLRAKRIAEAGEVVPVMYEGKSVIIQHVDEEQEMARIYFVDEPEREQDVPVRLLEER

Sequences:

>Translated_59_residues
METLRAKRIAEAGEVVPVMYEGKSVIIQHVDEEQEMARIYFVDEPEREQDVPVRLLEER
>Mature_59_residues
METLRAKRIAEAGEVVPVMYEGKSVIIQHVDEEQEMARIYFVDEPEREQDVPVRLLEER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore core

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sspH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSPH1_GEOTN (A4IN31)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001125480.1
- STRING:   A4IN31
- GeneID:   4966304
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_1365
- NMPDR:   fig|420246.5.peg.1323
- eggNOG:   NOG137763
- HOGENOM:   HBG304500
- OMA:   EREMARI
- ProtClustDB:   CLSK712712
- BioCyc:   GTHE420246:GTNG_1365-MONOMER
- HAMAP:   MF_00667
- InterPro:   IPR012610
- ProDom:   PD052450
- TIGRFAMs:   TIGR02861

Pfam domain/function: PF08141 SspH

EC number: NA

Molecular weight: Translated: 6958; Mature: 6958

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLRAKRIAEAGEVVPVMYEGKSVIIQHVDEEQEMARIYFVDEPEREQDVPVRLLEER
CCCCHHHHHHCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCC
>Mature Secondary Structure
METLRAKRIAEAGEVVPVMYEGKSVIIQHVDEEQEMARIYFVDEPEREQDVPVRLLEER
CCCCHHHHHHCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA