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The map label for this gene is ybgL [C]

Identifier: 138895015

GI number: 138895015

Start: 1439585

End: 1440355

Strand: Direct

Name: ybgL [C]

Synonym: GTNG_1353

Alternate gene names: 138895015

Gene position: 1439585-1440355 (Clockwise)

Preceding gene: 138895014

Following gene: 138895016

Centisome position: 40.55

GC content: 55.64

Gene sequence:

>771_bases
ATGAAAACGATTGATTTGAACTGTGATTTTGGTGAAAGTTTTGGTGTGTATCGGCTTGGAAAGGAAGAGATTTTGCCGTA
TATCACTTCTGTCAATATTGCCTGTGGATTTCATGCTGGCGATCCGCTTGTCATGCGGCAAACGGTACAGCTTGCCATCC
GTCATGGAGTCGCCATCGGTGCCCACCCGGGGTTTCCCGATTTGCTCGGCTTTGGACGTCGGATGATGGCTGTGTCACCG
GAGGAGGTGTATGCGTACGTCGTGTACCAAATCGGCGCGTTGGCCGCGTTCGTCAAGGCGGAAGGGGGAGTGATGACGCA
CGTCAAGCCGCACGGCGCCTTGTACAATATGGCGGCGAAAGATGCGAGGATTTCAGAAGCGATCGCCAAAGCGGTATATG
ATGTCGATCCGACGCTCATCTTGTACGGCCTGGCGGGTAGCGAGCTCATCCGCGCTGGACAGGCGCAAGGCTTGCAGACG
GCGAGTGAAGTGTTCGCCGACCGCACATATCAAGCTGACGGTTCGCTCACACCACGAAGCGACCCGCAGGCCATCATCGC
CGATGAAGATGAAGCGGTCAAGCAAGTGCTCATGATGGTTTGTGACCGGCATGTCCGCTCAGTGCAAGGGACGGCGGTGG
CGATTGAAGCCGATACGGTTTGTCTTCACGGCGACAATGAACAGGCGGTGCGGTTTGCTAAGCGGCTGCATGCAGCGTTA
CAAAATGAAGGCATCGCTATTCAGGCGATGCGGAAGGAGACGAGACGATGA

Upstream 100 bases:

>100_bases
CAGCCGGTTGCGCCGGAGGAAGCGGTGCAGCTTTATATCGAACAACAGCGGCGGCTGGGCTGCTGGATTGCGGCCATTCG
CCGCCAATGGGGGGAGAAAG

Downstream 100 bases:

>100_bases
ACAAAAAAGAAAGCAGGCTCAGCGTGCTGATCGGAGCGGTCTTTCTCATGGCGACATCGGCCATCGGCCCGGGATTTTTG
ACGCAAACGACCGTATTTAC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKTIDLNCDFGESFGVYRLGKEEILPYITSVNIACGFHAGDPLVMRQTVQLAIRHGVAIGAHPGFPDLLGFGRRMMAVSP
EEVYAYVVYQIGALAAFVKAEGGVMTHVKPHGALYNMAAKDARISEAIAKAVYDVDPTLILYGLAGSELIRAGQAQGLQT
ASEVFADRTYQADGSLTPRSDPQAIIADEDEAVKQVLMMVCDRHVRSVQGTAVAIEADTVCLHGDNEQAVRFAKRLHAAL
QNEGIAIQAMRKETRR

Sequences:

>Translated_256_residues
MKTIDLNCDFGESFGVYRLGKEEILPYITSVNIACGFHAGDPLVMRQTVQLAIRHGVAIGAHPGFPDLLGFGRRMMAVSP
EEVYAYVVYQIGALAAFVKAEGGVMTHVKPHGALYNMAAKDARISEAIAKAVYDVDPTLILYGLAGSELIRAGQAQGLQT
ASEVFADRTYQADGSLTPRSDPQAIIADEDEAVKQVLMMVCDRHVRSVQGTAVAIEADTVCLHGDNEQAVRFAKRLHAAL
QNEGIAIQAMRKETRR
>Mature_256_residues
MKTIDLNCDFGESFGVYRLGKEEILPYITSVNIACGFHAGDPLVMRQTVQLAIRHGVAIGAHPGFPDLLGFGRRMMAVSP
EEVYAYVVYQIGALAAFVKAEGGVMTHVKPHGALYNMAAKDARISEAIAKAVYDVDPTLILYGLAGSELIRAGQAQGLQT
ASEVFADRTYQADGSLTPRSDPQAIIADEDEAVKQVLMMVCDRHVRSVQGTAVAIEADTVCLHGDNEQAVRFAKRLHAAL
QNEGIAIQAMRKETRR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=246, Percent_Identity=56.5040650406504, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1353_GEOTN (A4IN19)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001125468.1
- ProteinModelPortal:   A4IN19
- SMR:   A4IN19
- STRING:   A4IN19
- GeneID:   4966292
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_1353
- NMPDR:   fig|420246.5.peg.1312
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- PhylomeDB:   A4IN19
- ProtClustDB:   PRK05406
- BioCyc:   GTHE420246:GTNG_1353-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27731; Mature: 27731

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIDLNCDFGESFGVYRLGKEEILPYITSVNIACGFHAGDPLVMRQTVQLAIRHGVAIG
CCEEEECCCCCCCCCEEECCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCEEEC
AHPGFPDLLGFGRRMMAVSPEEVYAYVVYQIGALAAFVKAEGGVMTHVKPHGALYNMAAK
CCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
DARISEAIAKAVYDVDPTLILYGLAGSELIRAGQAQGLQTASEVFADRTYQADGSLTPRS
HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
DPQAIIADEDEAVKQVLMMVCDRHVRSVQGTAVAIEADTVCLHGDNEQAVRFAKRLHAAL
CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCHHHHHHHHHHHHHH
QNEGIAIQAMRKETRR
HCCCEEEEEHHHHHCC
>Mature Secondary Structure
MKTIDLNCDFGESFGVYRLGKEEILPYITSVNIACGFHAGDPLVMRQTVQLAIRHGVAIG
CCEEEECCCCCCCCCEEECCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCEEEC
AHPGFPDLLGFGRRMMAVSPEEVYAYVVYQIGALAAFVKAEGGVMTHVKPHGALYNMAAK
CCCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
DARISEAIAKAVYDVDPTLILYGLAGSELIRAGQAQGLQTASEVFADRTYQADGSLTPRS
HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
DPQAIIADEDEAVKQVLMMVCDRHVRSVQGTAVAIEADTVCLHGDNEQAVRFAKRLHAAL
CCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEECCCHHHHHHHHHHHHHH
QNEGIAIQAMRKETRR
HCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA