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The map label for this gene is yqkD [H]

Identifier: 138895002

GI number: 138895002

Start: 1428001

End: 1428936

Strand: Direct

Name: yqkD [H]

Synonym: GTNG_1340

Alternate gene names: 138895002

Gene position: 1428001-1428936 (Clockwise)

Preceding gene: 138895001

Following gene: 138895003

Centisome position: 40.22

GC content: 50.75

Gene sequence:

>936_bases
ATGGAATTAGGCCGTGCATCACATCGTCCTATACGGCGTGTTTGGATTCCGTTGTCGCTTGCCATTGTTGCGCTCGGGGT
GCTGGCTTGCATCGGTTTGTCCGTTTATGTCGGCTGGCAGCTGACTCATAAAGAGCGCCAGCCGATTACCGAGGCGCCGC
ACGACTACGGGATGGTGTATGAAAATGTCATCTTTACAAGCAAAGACGGGGAGACAGCGCTCAAAGGCTGGGTCATTTCG
CCGCAGAAACCGGCGCGCATGACAGTCGTTTTTGCCCATGGGTACGGCGGCAACCGCATTCAGAAGAACGTTCCGTTTTT
GCCGCTTGCCAAGCGGTTGGCGGCGGAAGGCTACCGCGTCATTTTATTTGATTTCCGCGCCAGCGGCGAGTCGGACGGAG
AGATGATTACGATCGGTGTGAAAGAGAAAGAGGATTTGCTTGGCGTCATTGATTACGCAAAACAACATTACCGCGAGCCG
GTCGCTTTGTATGGCATCTCGATGGGAGCGGCGACGTCGATTTTGGCAGCGGCAGAGGATCGTGATGTTCGTGGGGTGAT
TGCTGATAGCCCGTTCAGTGACTTGGAATCGTATTTGCGCGCCAACATGCCCGTATGGACGCATTTGCCTGATGTGCCGT
TTACGTATTTAATTTTGGCGATTGTGCCGGCGTTGGCTGATTTGGATTTAAGATTATCCTCGCCGATTCACGCGGTTAAC
GATGTGGCACCAAGGCCGGTGTTGTTCATCCACAGTAAAGATGACCGTTCGATCCCGTACGAAGAAAGTATGAAGTTGTA
TGATACCCATCCAGATATTTTTCAACTATGGCTGACGGAAAAAGCAGATCATGTGAAAAGCTTCTCGTTATATAGAGAAG
AATATACAAAACGGGTATTGGCATTTTTGCGTTCATTGGAATCGCCATCTCCTTAA

Upstream 100 bases:

>100_bases
ACAGTTGCGCCATCGGCTTGAGAAAGCATAAAAATGATAGAGGAGAGAAGAGGGTCACGTGCAGTGGATAGAATGAAAAA
ATGAATGAGGAGAGGAAGCG

Downstream 100 bases:

>100_bases
GGTGGCCGAGGTTTGCTCTCGGTCGCTTTTTTATACCTGAAACAACATCATAAAAAGGAGCGAAGAACATGTGCGGCCGG
TTTACACTTATTGCGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MELGRASHRPIRRVWIPLSLAIVALGVLACIGLSVYVGWQLTHKERQPITEAPHDYGMVYENVIFTSKDGETALKGWVIS
PQKPARMTVVFAHGYGGNRIQKNVPFLPLAKRLAAEGYRVILFDFRASGESDGEMITIGVKEKEDLLGVIDYAKQHYREP
VALYGISMGAATSILAAAEDRDVRGVIADSPFSDLESYLRANMPVWTHLPDVPFTYLILAIVPALADLDLRLSSPIHAVN
DVAPRPVLFIHSKDDRSIPYEESMKLYDTHPDIFQLWLTEKADHVKSFSLYREEYTKRVLAFLRSLESPSP

Sequences:

>Translated_311_residues
MELGRASHRPIRRVWIPLSLAIVALGVLACIGLSVYVGWQLTHKERQPITEAPHDYGMVYENVIFTSKDGETALKGWVIS
PQKPARMTVVFAHGYGGNRIQKNVPFLPLAKRLAAEGYRVILFDFRASGESDGEMITIGVKEKEDLLGVIDYAKQHYREP
VALYGISMGAATSILAAAEDRDVRGVIADSPFSDLESYLRANMPVWTHLPDVPFTYLILAIVPALADLDLRLSSPIHAVN
DVAPRPVLFIHSKDDRSIPYEESMKLYDTHPDIFQLWLTEKADHVKSFSLYREEYTKRVLAFLRSLESPSP
>Mature_311_residues
MELGRASHRPIRRVWIPLSLAIVALGVLACIGLSVYVGWQLTHKERQPITEAPHDYGMVYENVIFTSKDGETALKGWVIS
PQKPARMTVVFAHGYGGNRIQKNVPFLPLAKRLAAEGYRVILFDFRASGESDGEMITIGVKEKEDLLGVIDYAKQHYREP
VALYGISMGAATSILAAAEDRDVRGVIADSPFSDLESYLRANMPVWTHLPDVPFTYLILAIVPALADLDLRLSSPIHAVN
DVAPRPVLFIHSKDDRSIPYEESMKLYDTHPDIFQLWLTEKADHVKSFSLYREEYTKRVLAFLRSLESPSP

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510965, Length=256, Percent_Identity=27.734375, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34918; Mature: 34918

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELGRASHRPIRRVWIPLSLAIVALGVLACIGLSVYVGWQLTHKERQPITEAPHDYGMVY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHCCEE
ENVIFTSKDGETALKGWVISPQKPARMTVVFAHGYGGNRIQKNVPFLPLAKRLAAEGYRV
EEEEEECCCCCCHHEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEE
ILFDFRASGESDGEMITIGVKEKEDLLGVIDYAKQHYREPVALYGISMGAATSILAAAED
EEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCC
RDVRGVIADSPFSDLESYLRANMPVWTHLPDVPFTYLILAIVPALADLDLRLSSPIHAVN
CCCEEEECCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHH
DVAPRPVLFIHSKDDRSIPYEESMKLYDTHPDIFQLWLTEKADHVKSFSLYREEYTKRVL
CCCCCCEEEEECCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLRSLESPSP
HHHHHHCCCCC
>Mature Secondary Structure
MELGRASHRPIRRVWIPLSLAIVALGVLACIGLSVYVGWQLTHKERQPITEAPHDYGMVY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHCCEE
ENVIFTSKDGETALKGWVISPQKPARMTVVFAHGYGGNRIQKNVPFLPLAKRLAAEGYRV
EEEEEECCCCCCHHEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEE
ILFDFRASGESDGEMITIGVKEKEDLLGVIDYAKQHYREPVALYGISMGAATSILAAAED
EEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCC
RDVRGVIADSPFSDLESYLRANMPVWTHLPDVPFTYLILAIVPALADLDLRLSSPIHAVN
CCCEEEECCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHH
DVAPRPVLFIHSKDDRSIPYEESMKLYDTHPDIFQLWLTEKADHVKSFSLYREEYTKRVL
CCCCCCEEEEECCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLRSLESPSP
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]