Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is xpaC [H]
Identifier: 138894970
GI number: 138894970
Start: 1396682
End: 1397326
Strand: Direct
Name: xpaC [H]
Synonym: GTNG_1308
Alternate gene names: 138894970
Gene position: 1396682-1397326 (Clockwise)
Preceding gene: 138894968
Following gene: 138894971
Centisome position: 39.34
GC content: 55.81
Gene sequence:
>645_bases ATGAAGCAACTGCTTCGCACGATATGGCGTTGGTTTGTTTCATGGAACGTTGGAATCATCGTTGCGGTCACTGTATTTAT CGCCGCTGATTTTCGCTTTTTGCCCTCACTCTTATCAGGGATGGGAGCGATGTGGGGGGTATCTGCTGTGATGAAAAGAC GGCAGCGCCGTTTGGTAGCCGACGTGTCGGCTGAGGAGCAGGCATATGTCCGCAGCCAGCTTCGCGAGGCACGCGCGTTA TGGAAACGGGTGCGCCGCGCCCGTTTCCGGCTTCGCTCGGTGGCCATGTGGCAAACCGTTTCCCGGTTGAGCGCGGTCGT CGACCGGATCATTCGTGCGGTTGAACAAAAACCGCATCAGCTCCGCCTTGTCCAACCGTTTTTCCTCAACGAGTGGCCGA CAGCGGTGGAGATGGTTGAAAAATACGTATACTTGTCGCAACAACCTGTGCAAAACGCCGACATGGCAGAAGCGCTGCGG AGGACGGAACGGCTGCTCGGCGAGCTGACCCAAGCGGCAGAGCGGCAGTTGCTTGAAGTGTTATCAAGCGATGTTTGGTC GCTTCAGACGGAAGCGAAAGTACTTGAGCAATCGCTCCAACAACCGGATCGTCTTCATTTGCTGCCGTCAAGGAAAGGGG AATGA
Upstream 100 bases:
>100_bases TCCTATACGTGCCGGTTGGCGATGAAACTTCTCGAGGCGATTGTACGTATATAAAATGGACGTGCTATAATAGAAAAAAA GATGAAGAAAGGGATGGACA
Downstream 100 bases:
>100_bases CAATGGATGAACGGAATCGTGAGATAGAACCAATCGACTTGTTTCGCGAACAGGAACGGACAAGCACGCTCGATGAACTG TTGGCTCAGCCGTTTTCCTC
Product: 5-bromo-4-chloroindolyl phosphate hydrolysis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKQLLRTIWRWFVSWNVGIIVAVTVFIAADFRFLPSLLSGMGAMWGVSAVMKRRQRRLVADVSAEEQAYVRSQLREARAL WKRVRRARFRLRSVAMWQTVSRLSAVVDRIIRAVEQKPHQLRLVQPFFLNEWPTAVEMVEKYVYLSQQPVQNADMAEALR RTERLLGELTQAAERQLLEVLSSDVWSLQTEAKVLEQSLQQPDRLHLLPSRKGE
Sequences:
>Translated_214_residues MKQLLRTIWRWFVSWNVGIIVAVTVFIAADFRFLPSLLSGMGAMWGVSAVMKRRQRRLVADVSAEEQAYVRSQLREARAL WKRVRRARFRLRSVAMWQTVSRLSAVVDRIIRAVEQKPHQLRLVQPFFLNEWPTAVEMVEKYVYLSQQPVQNADMAEALR RTERLLGELTQAAERQLLEVLSSDVWSLQTEAKVLEQSLQQPDRLHLLPSRKGE >Mature_214_residues MKQLLRTIWRWFVSWNVGIIVAVTVFIAADFRFLPSLLSGMGAMWGVSAVMKRRQRRLVADVSAEEQAYVRSQLREARAL WKRVRRARFRLRSVAMWQTVSRLSAVVDRIIRAVEQKPHQLRLVQPFFLNEWPTAVEMVEKYVYLSQQPVQNADMAEALR RTERLLGELTQAAERQLLEVLSSDVWSLQTEAKVLEQSLQQPDRLHLLPSRKGE
Specific function: In double copy it causes aberrant cell morphology, filamentation and inhibits sporulation. Hydrolyzes 5-bromo-4- chloroindolyl phosphate [H]
COG id: COG4915
COG function: function code R; 5-bromo-4-chloroindolyl phosphate hydrolysis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018770 [H]
Pfam domain/function: PF10112 Halogen_Hydrol [H]
EC number: NA
Molecular weight: Translated: 24969; Mature: 24969
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLRTIWRWFVSWNVGIIVAVTVFIAADFRFLPSLLSGMGAMWGVSAVMKRRQRRLVA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSAEEQAYVRSQLREARALWKRVRRARFRLRSVAMWQTVSRLSAVVDRIIRAVEQKPHQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LRLVQPFFLNEWPTAVEMVEKYVYLSQQPVQNADMAEALRRTERLLGELTQAAERQLLEV HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSDVWSLQTEAKVLEQSLQQPDRLHLLPSRKGE HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MKQLLRTIWRWFVSWNVGIIVAVTVFIAADFRFLPSLLSGMGAMWGVSAVMKRRQRRLVA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSAEEQAYVRSQLREARALWKRVRRARFRLRSVAMWQTVSRLSAVVDRIIRAVEQKPHQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LRLVQPFFLNEWPTAVEMVEKYVYLSQQPVQNADMAEALRRTERLLGELTQAAERQLLEV HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSDVWSLQTEAKVLEQSLQQPDRLHLLPSRKGE HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]