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The map label for this gene is ykwD [H]

Identifier: 138894966

GI number: 138894966

Start: 1392722

End: 1393459

Strand: Direct

Name: ykwD [H]

Synonym: GTNG_1304

Alternate gene names: 138894966

Gene position: 1392722-1393459 (Clockwise)

Preceding gene: 138894964

Following gene: 138894967

Centisome position: 39.23

GC content: 48.64

Gene sequence:

>738_bases
ATGAAAAAGAAAATGGTAGCCACGATCGCCGCTTCGGTTGCACTCATCGGTGCTTCGTTTGCGGCAACGACGAAAACGGA
AGCAGCAGGGACGACATGCCCGACGACGAACGTGTATCAAGTAAAATATACGAATACAAACGTTCAAGATTTGGAAAAAT
GGTTGAAACAATACTTCCCGTTTGTGTCGATCCAACCGGCTAAACAGGCACAACAACCAACGGTAAAACAGCCGACAGAG
GCGAAGCCGCAAGCGCCGGCAACGGTCAAACAGCCAGAGAAGAAACCGGCAGCTAATACGCAAGCGCCAGCAAAAACGCC
AGCAACGGCACCAAAGTCTACAACACAAGAAACAACGGGCTTAAATGCGTATGAGCAGCAAGTCGTTGAATTGACGAACA
AAGAACGGGCAAAACATGGTCTGCCAGCGCTTCAAGTCGACTTAGCCCTCAGCAAAGTCGCCCGTGAAAAATCACGCGAT
ATGGCGGTTAACAACTACTTCTCGCACAACAGCCCGACGTACGGCTCCCCGTTTGAGATGATGAAAAAATTCGGCATCTC
GTACACAGCTGCTGGGGAAAACATTGCTAAAGGCCAACGCACACCGCAAGAAGTGGTTAATGCGTGGATGAACAGTGAAG
GTCACCGGGCCAACATTTTGAACAAAAACTTTACACATATCGGCGTTGGTTTTGAAGAAAACGGCTATATTTGGACGCAG
CAATTTATCCGCAAGTAA

Upstream 100 bases:

>100_bases
TGAGAGGACATCGGAACGGTCCTTATCGAACAACGCGAGCCTCATTGACAGACGCAACAATCTTTGAAACTTTGAAAATA
GAAACCAAGGAGGAATTCCA

Downstream 100 bases:

>100_bases
GAACGGCGTCTTTCCCCATCCTGTCCATCTGTCTGATGGACAGGATTTTTTTTGCTAGCATAGTTCTCTAACAAAAAATA
GAAAACTATGTTATAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKKMVATIAASVALIGASFAATTKTEAAGTTCPTTNVYQVKYTNTNVQDLEKWLKQYFPFVSIQPAKQAQQPTVKQPTE
AKPQAPATVKQPEKKPAANTQAPAKTPATAPKSTTQETTGLNAYEQQVVELTNKERAKHGLPALQVDLALSKVAREKSRD
MAVNNYFSHNSPTYGSPFEMMKKFGISYTAAGENIAKGQRTPQEVVNAWMNSEGHRANILNKNFTHIGVGFEENGYIWTQ
QFIRK

Sequences:

>Translated_245_residues
MKKKMVATIAASVALIGASFAATTKTEAAGTTCPTTNVYQVKYTNTNVQDLEKWLKQYFPFVSIQPAKQAQQPTVKQPTE
AKPQAPATVKQPEKKPAANTQAPAKTPATAPKSTTQETTGLNAYEQQVVELTNKERAKHGLPALQVDLALSKVAREKSRD
MAVNNYFSHNSPTYGSPFEMMKKFGISYTAAGENIAKGQRTPQEVVNAWMNSEGHRANILNKNFTHIGVGFEENGYIWTQ
QFIRK
>Mature_245_residues
MKKKMVATIAASVALIGASFAATTKTEAAGTTCPTTNVYQVKYTNTNVQDLEKWLKQYFPFVSIQPAKQAQQPTVKQPTE
AKPQAPATVKQPEKKPAANTQAPAKTPATAPKSTTQETTGLNAYEQQVVELTNKERAKHGLPALQVDLALSKVAREKSRD
MAVNNYFSHNSPTYGSPFEMMKKFGISYTAAGENIAKGQRTPQEVVNAWMNSEGHRANILNKNFTHIGVGFEENGYIWTQ
QFIRK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 26966; Mature: 26966

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMVATIAASVALIGASFAATTKTEAAGTTCPTTNVYQVKYTNTNVQDLEKWLKQYFP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
FVSIQPAKQAQQPTVKQPTEAKPQAPATVKQPEKKPAANTQAPAKTPATAPKSTTQETTG
CEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
LNAYEQQVVELTNKERAKHGLPALQVDLALSKVAREKSRDMAVNNYFSHNSPTYGSPFEM
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHH
MKKFGISYTAAGENIAKGQRTPQEVVNAWMNSEGHRANILNKNFTHIGVGFEENGYIWTQ
HHHHCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCCEEEHH
QFIRK
HHHCC
>Mature Secondary Structure
MKKKMVATIAASVALIGASFAATTKTEAAGTTCPTTNVYQVKYTNTNVQDLEKWLKQYFP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
FVSIQPAKQAQQPTVKQPTEAKPQAPATVKQPEKKPAANTQAPAKTPATAPKSTTQETTG
CEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
LNAYEQQVVELTNKERAKHGLPALQVDLALSKVAREKSRDMAVNNYFSHNSPTYGSPFEM
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHH
MKKFGISYTAAGENIAKGQRTPQEVVNAWMNSEGHRANILNKNFTHIGVGFEENGYIWTQ
HHHHCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCCEEEHH
QFIRK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]