| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138894958
Identifier: 138894958
GI number: 138894958
Start: 1383558
End: 1384133
Strand: Reverse
Name: 138894958
Synonym: GTNG_1296
Alternate gene names: NA
Gene position: 1384133-1383558 (Counterclockwise)
Preceding gene: 138894959
Following gene: 138894953
Centisome position: 38.99
GC content: 50.52
Gene sequence:
>576_bases TTGCCAAACGGGCAGGTGTTAGTTGTAGTTACCAGTCATGCCAAGGCACGAAGCGGGACATTATACCTTTACGAAAAACA AAACGGAACATGGCGGAAAGTGCTCGCGAACATCCGCGTTGTTGTCGGTAAAAACGGCATTGGCAAACAAAAAGAGGGAG ATGGAAAGACGCCCGCTGGCGTTTACCCATTAGGTACAGCGTTCGGCACCGCCAAAAAGCCGGCGGGGCTGAAAATCCCC TACCGGCAAACAACCGCTTACGATTATTGGGTGGACGATCCGACATCCAAAGACTACAACCGCTGGATTTATTACCGCGG CAACCCGCATCGGCGCTGGAAATCGTTTGAACGCCTCACTCACCCACTTTACAAATATGCCGTCGTCGTTCGTTACAACG ACAGCCCGATCGTGAAAGGAAAAGGAAGCGCCATCTTTCTGCACATTTGGCCACGCCCTTCCAGTTATACGCTCGGCTGC ATCGCCATGGCTGAAAAAGATCTCTTATCCGTCATCAAGCGGCTTGACGCCAAAAAGAAGCCCATCATTCTCATTAGCGA ACAGAAAAAATTATGA
Upstream 100 bases:
>100_bases GGTTTTGGCTGCTTTGTAGCTTCGTGCTTGCCCTATCAGCCGGGCGAGCAGACGCTTCGGCGCTATCAGTAGAAAAAAGA TTCTCAATCGGCTGAACAAG
Downstream 100 bases:
>100_bases ATCGGATTCGCCAAATGAGCTCACGGGAGACAGTGGGCTCATTTTGTGCTGATCTCCTCAAGCAACGCATCGCCGTTTTT GCTGACGCGCACATAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Family Protein; S-Layer Domain Protein; Cytoplasmic Protein; S-Layer Domain-Containing Protein; S-Layer Homology And Secreted GW Repeat Fusion Protein; Signal Peptide; SH3 Domain-Containing Protein; LOW QUALITY PROTEIN LamB/YcsF Family Protein; Secreted GW Repeat; Lipoprotein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MPNGQVLVVVTSHAKARSGTLYLYEKQNGTWRKVLANIRVVVGKNGIGKQKEGDGKTPAGVYPLGTAFGTAKKPAGLKIP YRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRYNDSPIVKGKGSAIFLHIWPRPSSYTLGC IAMAEKDLLSVIKRLDAKKKPIILISEQKKL
Sequences:
>Translated_191_residues MPNGQVLVVVTSHAKARSGTLYLYEKQNGTWRKVLANIRVVVGKNGIGKQKEGDGKTPAGVYPLGTAFGTAKKPAGLKIP YRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRYNDSPIVKGKGSAIFLHIWPRPSSYTLGC IAMAEKDLLSVIKRLDAKKKPIILISEQKKL >Mature_190_residues PNGQVLVVVTSHAKARSGTLYLYEKQNGTWRKVLANIRVVVGKNGIGKQKEGDGKTPAGVYPLGTAFGTAKKPAGLKIPY RQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRYNDSPIVKGKGSAIFLHIWPRPSSYTLGCI AMAEKDLLSVIKRLDAKKKPIILISEQKKL
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21653; Mature: 21522
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNGQVLVVVTSHAKARSGTLYLYEKQNGTWRKVLANIRVVVGKNGIGKQKEGDGKTPAG CCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC VYPLGTAFGTAKKPAGLKIPYRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHH HPLYKYAVVVRYNDSPIVKGKGSAIFLHIWPRPSSYTLGCIAMAEKDLLSVIKRLDAKKK CCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHCCCCCC PIILISEQKKL CEEEEECCCCC >Mature Secondary Structure PNGQVLVVVTSHAKARSGTLYLYEKQNGTWRKVLANIRVVVGKNGIGKQKEGDGKTPAG CCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC VYPLGTAFGTAKKPAGLKIPYRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHH HPLYKYAVVVRYNDSPIVKGKGSAIFLHIWPRPSSYTLGCIAMAEKDLLSVIKRLDAKKK CCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHCCCCCC PIILISEQKKL CEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA