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The map label for this gene is ddpX [H]

Identifier: 138894902

GI number: 138894902

Start: 1304267

End: 1304896

Strand: Direct

Name: ddpX [H]

Synonym: GTNG_1240

Alternate gene names: 138894902

Gene position: 1304267-1304896 (Clockwise)

Preceding gene: 138894901

Following gene: 138894903

Centisome position: 36.74

GC content: 39.84

Gene sequence:

>630_bases
ATGTCGCTAACAGGGATTTCAGAAAAAATAGTTGTCGAACCGTATTATTTTCAAAACAATATTCCTGGTGCGCCGAACGA
TTGCTATCTTAGGGAAGGTGCTGTCAAACGTCTTTTGAAAGCGGTTCACTTCCTACCTGTGGATCATTATTTTATCGTTT
TTGACGCCTGGCGACCTTATAAAGTTCAGTTAGCACTGTATCGACAATTCGAAAAGCAATTACAGTTAAAAGGTTTAGCA
GGGAATGAACTGAAAAAAGAATTGACGAAGTATGTGGACAGACCGTCGGAGGATCCGATGCGACCATCCAATCATTTAAC
TGGTGGTGCGATTGATTTAACCATTGCGAATAAACAAGGTCCGCTGAATATGGGGTCCAAATTTGATGAATTTACGGAGA
TGTCAAGAACGGACTATTTTGAACAAATTAAAAATCCAAGTCCATTAGATAGGGAGATTAAAGAGAATCGCAAGCTATTA
AAAAGCATTATGGAAAAGGCCGGATTTACAAATTACGACGAAGAATGGTGGCACTATGACTACGGCAATCAAAATTGGGC
ACTGAAAACGGGAAATGAAGCCATTTATGGTGGTGTATTGGAATTGGCTGGGCATCGAATCACTTACTAA

Upstream 100 bases:

>100_bases
AAGATGGAGTAGATTTATCAATAAGTTTTTAAAAGAGGGGTGACGAACAATTTATCTAACGAAGGAACAGATTCCTATTC
ATGAGAATCATGAAAAACTC

Downstream 100 bases:

>100_bases
TTCCTGCGCCTTCAGGTTTGAAAAAGTGCCGAAAGGGTGCTTACTGAAATGCAAATTCGAGTACTCGCGATCGGACCTCG
CGATATTGAAAAAATGATTA

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSLTGISEKIVVEPYYFQNNIPGAPNDCYLREGAVKRLLKAVHFLPVDHYFIVFDAWRPYKVQLALYRQFEKQLQLKGLA
GNELKKELTKYVDRPSEDPMRPSNHLTGGAIDLTIANKQGPLNMGSKFDEFTEMSRTDYFEQIKNPSPLDREIKENRKLL
KSIMEKAGFTNYDEEWWHYDYGNQNWALKTGNEAIYGGVLELAGHRITY

Sequences:

>Translated_209_residues
MSLTGISEKIVVEPYYFQNNIPGAPNDCYLREGAVKRLLKAVHFLPVDHYFIVFDAWRPYKVQLALYRQFEKQLQLKGLA
GNELKKELTKYVDRPSEDPMRPSNHLTGGAIDLTIANKQGPLNMGSKFDEFTEMSRTDYFEQIKNPSPLDREIKENRKLL
KSIMEKAGFTNYDEEWWHYDYGNQNWALKTGNEAIYGGVLELAGHRITY
>Mature_208_residues
SLTGISEKIVVEPYYFQNNIPGAPNDCYLREGAVKRLLKAVHFLPVDHYFIVFDAWRPYKVQLALYRQFEKQLQLKGLAG
NELKKELTKYVDRPSEDPMRPSNHLTGGAIDLTIANKQGPLNMGSKFDEFTEMSRTDYFEQIKNPSPLDREIKENRKLLK
SIMEKAGFTNYDEEWWHYDYGNQNWALKTGNEAIYGGVLELAGHRITY

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 24261; Mature: 24130

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTGISEKIVVEPYYFQNNIPGAPNDCYLREGAVKRLLKAVHFLPVDHYFIVFDAWRPY
CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCE
KVQLALYRQFEKQLQLKGLAGNELKKELTKYVDRPSEDPMRPSNHLTGGAIDLTIANKQG
EEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
PLNMGSKFDEFTEMSRTDYFEQIKNPSPLDREIKENRKLLKSIMEKAGFTNYDEEWWHYD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
YGNQNWALKTGNEAIYGGVLELAGHRITY
CCCCEEEEECCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLTGISEKIVVEPYYFQNNIPGAPNDCYLREGAVKRLLKAVHFLPVDHYFIVFDAWRPY
CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCE
KVQLALYRQFEKQLQLKGLAGNELKKELTKYVDRPSEDPMRPSNHLTGGAIDLTIANKQG
EEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
PLNMGSKFDEFTEMSRTDYFEQIKNPSPLDREIKENRKLLKSIMEKAGFTNYDEEWWHYD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
YGNQNWALKTGNEAIYGGVLELAGHRITY
CCCCEEEEECCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]