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The map label for this gene is yrkC [H]

Identifier: 138894898

GI number: 138894898

Start: 1301130

End: 1301669

Strand: Direct

Name: yrkC [H]

Synonym: GTNG_1236

Alternate gene names: 138894898

Gene position: 1301130-1301669 (Clockwise)

Preceding gene: 138894896

Following gene: 138894899

Centisome position: 36.65

GC content: 49.44

Gene sequence:

>540_bases
ATGTATACCGTGTCTTTTTTACCTTCCTATCCTTCTGTCTACCCGTATATGCATCCGTATCCAGCTTATGTTTATCCACC
GGTGCACAATTACGGCGGGTTGCCTTACGGTTCGGTTCCGTACAAAGAGAATATCAAGCTGAAAGATTACGGGCCGGAGC
CGTTTGTCATTTCGATTAGCGAGGCGGCAAAACAAAACAATACGTACCGCACCGCTTTATGGACCGGACCGCATTTGCAA
GTGACGTTAATGAGCTTGAATGTCGGGGAAGATATCGGATTGGAAATTCACCCCTATGTCGATCAATTTTTGCGCATTGA
ACAAGGAGAAGGAATCGTCCGAATGGGCAGAAGGAAAGACAAGTTGACGTTTGAGAGAAACGTACGTGCCGGTTCCGCGA
TCATGGTTCCAGCCGGAACATGGCATAATGTTATCAACACCGGAACGATCCCGCTCAAGCTCTATTCCATCTATGCACCC
CCGCAGCACCCGCACGGCACTGTACACCGAACAAAGGCCGATGCCCTCGCAGCTGAATAG

Upstream 100 bases:

>100_bases
GAGCAGGAGGAGGCACAGAAAAGATATGCCTAAAACACGAGTCAACTTCTTTGTGGTTGTGCATAAGATGACGGTGACTA
ATCAGTGAAGAGGTGGAGCG

Downstream 100 bases:

>100_bases
AAAACAAGCGGCTTGAGAAATGAGCGCTATATCTCAAGCCGTTTTTTTGTCCCACATTCTCCGATTGCCTGTCCTCGTGC
GTTGGGGAGTTCGGAGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYTVSFLPSYPSVYPYMHPYPAYVYPPVHNYGGLPYGSVPYKENIKLKDYGPEPFVISISEAAKQNNTYRTALWTGPHLQ
VTLMSLNVGEDIGLEIHPYVDQFLRIEQGEGIVRMGRRKDKLTFERNVRAGSAIMVPAGTWHNVINTGTIPLKLYSIYAP
PQHPHGTVHRTKADALAAE

Sequences:

>Translated_179_residues
MYTVSFLPSYPSVYPYMHPYPAYVYPPVHNYGGLPYGSVPYKENIKLKDYGPEPFVISISEAAKQNNTYRTALWTGPHLQ
VTLMSLNVGEDIGLEIHPYVDQFLRIEQGEGIVRMGRRKDKLTFERNVRAGSAIMVPAGTWHNVINTGTIPLKLYSIYAP
PQHPHGTVHRTKADALAAE
>Mature_179_residues
MYTVSFLPSYPSVYPYMHPYPAYVYPPVHNYGGLPYGSVPYKENIKLKDYGPEPFVISISEAAKQNNTYRTALWTGPHLQ
VTLMSLNVGEDIGLEIHPYVDQFLRIEQGEGIVRMGRRKDKLTFERNVRAGSAIMVPAGTWHNVINTGTIPLKLYSIYAP
PQHPHGTVHRTKADALAAE

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 20145; Mature: 20145

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTVSFLPSYPSVYPYMHPYPAYVYPPVHNYGGLPYGSVPYKENIKLKDYGPEPFVISIS
CEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEC
EAAKQNNTYRTALWTGPHLQVTLMSLNVGEDIGLEIHPYVDQFLRIEQGEGIVRMGRRKD
HHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEECCCHHHHEEECCCCCEEEECCCCC
KLTFERNVRAGSAIMVPAGTWHNVINTGTIPLKLYSIYAPPQHPHGTVHRTKADALAAE
CEEEECCCCCCCEEEEECCCCCHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MYTVSFLPSYPSVYPYMHPYPAYVYPPVHNYGGLPYGSVPYKENIKLKDYGPEPFVISIS
CEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEC
EAAKQNNTYRTALWTGPHLQVTLMSLNVGEDIGLEIHPYVDQFLRIEQGEGIVRMGRRKD
HHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEECCCHHHHEEECCCCCEEEECCCCC
KLTFERNVRAGSAIMVPAGTWHNVINTGTIPLKLYSIYAPPQHPHGTVHRTKADALAAE
CEEEECCCCCCCEEEEECCCCCHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]