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The map label for this gene is ccdC [H]

Identifier: 138894860

GI number: 138894860

Start: 1265998

End: 1266480

Strand: Direct

Name: ccdC [H]

Synonym: GTNG_1196

Alternate gene names: 138894860

Gene position: 1265998-1266480 (Clockwise)

Preceding gene: 138894859

Following gene: 138894862

Centisome position: 35.66

GC content: 46.38

Gene sequence:

>483_bases
ATGGCTTTGTTGGCGCTTATTACATCGCTCATCGCCGTTGTGATGACTTTGTTCGTCTTTTTTGTGCGCATGAAAGCGGC
AGAAAAGCCGACGAACGCCAAAAAAATCATTTTACCGCCGTTGTTTATGAGCACAGGGGCGCTCATGTTCATCGATCCGG
TTTTTCGTGTTACGCGTGGGGAACTCATCGAAGCGGTGGTTCTCGGTTTGTTTTTCTCGCTGTTTCTCATTAAAACATCG
AAATTTGAAATCCGCGGCCATGATATTTACTTAAAACGTTCGAAAGCGTTTGTTTGGATTTTGCTCAGTTTGATCGTCAT
TCGCTTTGGCTTAAAGACGTATTTGGGACGGACGATCGATTATGGCCAACTAAGCGGCATGTTTTATTTGCTCGCGTTTT
CCATGATTGTCCCATGGCGGATCGCCATGTATGTGTCGTATAAAAAACTGGCCGCGCAGCTGAAGCCGCCGATGCTCACC
TGA

Upstream 100 bases:

>100_bases
ACTTCCCGGCGCAGCTGGAGCGTTTGAAGAGGCGGTAGGCAACCAGAGCAGTTTTTGCTATAATAACAGTATTGTCCGTG
AATTTTATGTGAAGAAGGTG

Downstream 100 bases:

>100_bases
TCTTCTCCTTCACTTGTGTCTACGGCGTCAAAACGAGAGGGTTCCGGTCGAGGGAAGAGGAGATGGAAGATAAAGAAAAA
GCAACGTAATATCCCTTTTT

Product: CcdC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MALLALITSLIAVVMTLFVFFVRMKAAEKPTNAKKIILPPLFMSTGALMFIDPVFRVTRGELIEAVVLGLFFSLFLIKTS
KFEIRGHDIYLKRSKAFVWILLSLIVIRFGLKTYLGRTIDYGQLSGMFYLLAFSMIVPWRIAMYVSYKKLAAQLKPPMLT

Sequences:

>Translated_160_residues
MALLALITSLIAVVMTLFVFFVRMKAAEKPTNAKKIILPPLFMSTGALMFIDPVFRVTRGELIEAVVLGLFFSLFLIKTS
KFEIRGHDIYLKRSKAFVWILLSLIVIRFGLKTYLGRTIDYGQLSGMFYLLAFSMIVPWRIAMYVSYKKLAAQLKPPMLT
>Mature_159_residues
ALLALITSLIAVVMTLFVFFVRMKAAEKPTNAKKIILPPLFMSTGALMFIDPVFRVTRGELIEAVVLGLFFSLFLIKTSK
FEIRGHDIYLKRSKAFVWILLSLIVIRFGLKTYLGRTIDYGQLSGMFYLLAFSMIVPWRIAMYVSYKKLAAQLKPPMLT

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 18238; Mature: 18107

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLALITSLIAVVMTLFVFFVRMKAAEKPTNAKKIILPPLFMSTGALMFIDPVFRVTRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHH
ELIEAVVLGLFFSLFLIKTSKFEIRGHDIYLKRSKAFVWILLSLIVIRFGLKTYLGRTID
HHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC
YGQLSGMFYLLAFSMIVPWRIAMYVSYKKLAAQLKPPMLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALLALITSLIAVVMTLFVFFVRMKAAEKPTNAKKIILPPLFMSTGALMFIDPVFRVTRG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHH
ELIEAVVLGLFFSLFLIKTSKFEIRGHDIYLKRSKAFVWILLSLIVIRFGLKTYLGRTID
HHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC
YGQLSGMFYLLAFSMIVPWRIAMYVSYKKLAAQLKPPMLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]