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The map label for this gene is fapR [H]

Identifier: 138894708

GI number: 138894708

Start: 1109178

End: 1109774

Strand: Direct

Name: fapR [H]

Synonym: GTNG_1040

Alternate gene names: 138894708

Gene position: 1109178-1109774 (Clockwise)

Preceding gene: 138894707

Following gene: 138894709

Centisome position: 31.24

GC content: 53.77

Gene sequence:

>597_bases
ATGAGAAAAAGCAAACGCGAACGGCAACGGTTGCTGCAGGAGACGATCCGGGAAAACCCGTTTGTGACTGACGAAGAGTT
GGCGGAGAAATTTTCCGTCAGCGTGCAGACGATCCGCCTTGACCGGCTTGAGCTGTCGATTCCCGAGCTGCGCGAGCGCA
TCAAACACGTCGCCCGTCAGTCGTTCGCTGATAAAGTGCGGGCGTTGCCGCTTGAAGAAGTGATTGGAGATATCATTGAC
ATCGAGCCAGATGCGAGTGCCATTTCGATTTTTGATGTCAAAGAAGAACACGTTTTTCGGCGCACCCGCATTGCCCGCGG
CCATCATTTGTTCGCCCAAGCGAATTCGCTCGCTGTCGCCGTCATTCATGATGAATTGGCACTGACGGCGAAGGCGACGA
TCCGTTTCGTGCGCCAAGTGAAAGCAGGCGAGCGGGTCGTGGCGAAGGCGAAAGTAACGGGCAAAACGAAGAGCGGGCGC
ACGGTCGTTGATGTGAACAGCTATGTCGGCCAAGAGCTCGTGTTTTCAGGAACGTTCGAAATGTATCGCTCAAACATGGA
AAAAAAGGATGGCGACAGCAATGAATATCGCGATTGA

Upstream 100 bases:

>100_bases
AAATGTGGACGCTTTTCACTTTTTCTGCTTGCATTCCGGTTTTTGATATTATATATTACTTTTAGTACCTAGTCATAAAA
TCGGACGGTGTAACGAATCG

Downstream 100 bases:

>100_bases
CGCTATGGGGGGAGATCACGCCCCGCAAGAAATCGTGCGCGGGGCGGCAAGAGCCGCCGCGCATTTTTCTGATATTCGCA
TTACCTTAATTGGCGATGAA

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRKSKRERQRLLQETIRENPFVTDEELAEKFSVSVQTIRLDRLELSIPELRERIKHVARQSFADKVRALPLEEVIGDIID
IEPDASAISIFDVKEEHVFRRTRIARGHHLFAQANSLAVAVIHDELALTAKATIRFVRQVKAGERVVAKAKVTGKTKSGR
TVVDVNSYVGQELVFSGTFEMYRSNMEKKDGDSNEYRD

Sequences:

>Translated_198_residues
MRKSKRERQRLLQETIRENPFVTDEELAEKFSVSVQTIRLDRLELSIPELRERIKHVARQSFADKVRALPLEEVIGDIID
IEPDASAISIFDVKEEHVFRRTRIARGHHLFAQANSLAVAVIHDELALTAKATIRFVRQVKAGERVVAKAKVTGKTKSGR
TVVDVNSYVGQELVFSGTFEMYRSNMEKKDGDSNEYRD
>Mature_198_residues
MRKSKRERQRLLQETIRENPFVTDEELAEKFSVSVQTIRLDRLELSIPELRERIKHVARQSFADKVRALPLEEVIGDIID
IEPDASAISIFDVKEEHVFRRTRIARGHHLFAQANSLAVAVIHDELALTAKATIRFVRQVKAGERVVAKAKVTGKTKSGR
TVVDVNSYVGQELVFSGTFEMYRSNMEKKDGDSNEYRD

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001034
- InterPro:   IPR002539
- InterPro:   IPR017275
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08220 HTH_DeoR; PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 22651; Mature: 22651

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSKRERQRLLQETIRENPFVTDEELAEKFSVSVQTIRLDRLELSIPELRERIKHVARQ
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHH
SFADKVRALPLEEVIGDIIDIEPDASAISIFDVKEEHVFRRTRIARGHHLFAQANSLAVA
HHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHEEECCCEEEE
VIHDELALTAKATIRFVRQVKAGERVVAKAKVTGKTKSGRTVVDVNSYVGQELVFSGTFE
EEECHHHHHHHHHHHHHHHHHCCCHHEEHEEECCCCCCCCEEEECHHHHCHHHHHHHHHH
MYRSNMEKKDGDSNEYRD
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKSKRERQRLLQETIRENPFVTDEELAEKFSVSVQTIRLDRLELSIPELRERIKHVARQ
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHH
SFADKVRALPLEEVIGDIIDIEPDASAISIFDVKEEHVFRRTRIARGHHLFAQANSLAVA
HHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHEEECCCEEEE
VIHDELALTAKATIRFVRQVKAGERVVAKAKVTGKTKSGRTVVDVNSYVGQELVFSGTFE
EEECHHHHHHHHHHHHHHHHHCCCHHEEHEEECCCCCCCCEEEECHHHHCHHHHHHHHHH
MYRSNMEKKDGDSNEYRD
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA