Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is ylxW [H]
Identifier: 138894656
GI number: 138894656
Start: 1053463
End: 1054194
Strand: Direct
Name: ylxW [H]
Synonym: GTNG_0986
Alternate gene names: 138894656
Gene position: 1053463-1054194 (Clockwise)
Preceding gene: 138894655
Following gene: 138894657
Centisome position: 29.67
GC content: 49.59
Gene sequence:
>732_bases ATGAACCGACGAAAAAGGAGGATGACGATGAGACGAAAAGTCCGTAGCCGCGTCCTCCTTACTTTTATTTGTTTTATCTT TGGGACTATGCTTGGGTTTTCGTACCAGCATACGAAAGAGGAGGAGCCACGTCGCCAATGGAGCGACAGTGAGTGGAAAA AGGAGTACGAGTATCGTTCGGCGCTTATCGCTTTGCAAAAAGAAAACCGGTCGCTAAAGCAGCAGCTTGTCAAAAAGCAA GCTGAATTGACCGAATGGGAAAAAAAATTGGCCGAGCAACAGTCGAATGAGGTCGGGTTGGCGAAAGAGGCAGAACAGCT GCGCATGCATGTTGGAAAGGCGAGGGTCAAAGGGAAAGGCGTAGCAGTCACGCTTTCCGATTCCTCTTATATCCCCTCTG AAGCGAGTGCTACTGATTACATCGTTCATGAACAGCACGTATGGAAAGTTGTTCACGAGATGCTTATTTCCGGTGCTGAG GCCGTTGCTATTAATGGGCAGCGTATTTCCCATCGCTCTTACATTGTCTGTAATGGTCCGGTCATTGAAGTGGACGGGAC ACAACATGCGGCTCCGTTTGTCATTTCGGCGATCGGCGACCCGGATGTGCTATCATCCGCGCTTGAGTTAGCCGGCGGTG TCGTCGACCAGCTAGTCGAAGACCATATCGATGTGAAAGTGGAAAAGCAAAAGAACATCGTTCTCGATCCGGTATTTGCG CCCAAACCGTAA
Upstream 100 bases:
>100_bases TTTGCTGATAAGCTGTCGCATTATCCGTCGATTATCGCCGAGCTCGACCGGAATGTCAAAGGAGTCATTCACCTGGAAGT AGGCAGCTATTTTGTTCCGT
Downstream 100 bases:
>100_bases AAAAGGGCGGGAAGGAGCGTTGAAGCATGTTGGAGTGGAAAAAACGGTTATCTTTTGTCATCGTCGCCGCCGTGTTTGGC GTGATGCTCGCGGTTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNRRKRRMTMRRKVRSRVLLTFICFIFGTMLGFSYQHTKEEEPRRQWSDSEWKKEYEYRSALIALQKENRSLKQQLVKKQ AELTEWEKKLAEQQSNEVGLAKEAEQLRMHVGKARVKGKGVAVTLSDSSYIPSEASATDYIVHEQHVWKVVHEMLISGAE AVAINGQRISHRSYIVCNGPVIEVDGTQHAAPFVISAIGDPDVLSSALELAGGVVDQLVEDHIDVKVEKQKNIVLDPVFA PKP
Sequences:
>Translated_243_residues MNRRKRRMTMRRKVRSRVLLTFICFIFGTMLGFSYQHTKEEEPRRQWSDSEWKKEYEYRSALIALQKENRSLKQQLVKKQ AELTEWEKKLAEQQSNEVGLAKEAEQLRMHVGKARVKGKGVAVTLSDSSYIPSEASATDYIVHEQHVWKVVHEMLISGAE AVAINGQRISHRSYIVCNGPVIEVDGTQHAAPFVISAIGDPDVLSSALELAGGVVDQLVEDHIDVKVEKQKNIVLDPVFA PKP >Mature_243_residues MNRRKRRMTMRRKVRSRVLLTFICFIFGTMLGFSYQHTKEEEPRRQWSDSEWKKEYEYRSALIALQKENRSLKQQLVKKQ AELTEWEKKLAEQQSNEVGLAKEAEQLRMHVGKARVKGKGVAVTLSDSSYIPSEASATDYIVHEQHVWKVVHEMLISGAE AVAINGQRISHRSYIVCNGPVIEVDGTQHAAPFVISAIGDPDVLSSALELAGGVVDQLVEDHIDVKVEKQKNIVLDPVFA PKP
Specific function: May be involved in cell division and sporulation [H]
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 27593; Mature: 27593
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRKRRMTMRRKVRSRVLLTFICFIFGTMLGFSYQHTKEEEPRRQWSDSEWKKEYEYRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHH ALIALQKENRSLKQQLVKKQAELTEWEKKLAEQQSNEVGLAKEAEQLRMHVGKARVKGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VAVTLSDSSYIPSEASATDYIVHEQHVWKVVHEMLISGAEAVAINGQRISHRSYIVCNGP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCEEEEECCC VIEVDGTQHAAPFVISAIGDPDVLSSALELAGGVVDQLVEDHIDVKVEKQKNIVLDPVFA EEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCC PKP CCC >Mature Secondary Structure MNRRKRRMTMRRKVRSRVLLTFICFIFGTMLGFSYQHTKEEEPRRQWSDSEWKKEYEYRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHH ALIALQKENRSLKQQLVKKQAELTEWEKKLAEQQSNEVGLAKEAEQLRMHVGKARVKGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VAVTLSDSSYIPSEASATDYIVHEQHVWKVVHEMLISGAEAVAINGQRISHRSYIVCNGP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCEEEEECCC VIEVDGTQHAAPFVISAIGDPDVLSSALELAGGVVDQLVEDHIDVKVEKQKNIVLDPVFA EEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCC PKP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2556375; 9384377; 12207695 [H]