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The map label for this gene is ylbF [H]

Identifier: 138894630

GI number: 138894630

Start: 1028180

End: 1028626

Strand: Direct

Name: ylbF [H]

Synonym: GTNG_0960

Alternate gene names: 138894630

Gene position: 1028180-1028626 (Clockwise)

Preceding gene: 138894629

Following gene: 138894631

Centisome position: 28.96

GC content: 54.59

Gene sequence:

>447_bases
GTGAGGATTGCTACTCTCGAGCGCATCGAGATTTTGGATAAAGCGGAAGCGTTAGCGAAAATGGTTGTTGAGTCAGATGT
GGCGGCCGACTATCGTCGCGCGTTTTGGCGGCTCAAGCAAGACCACCGTGCTCAACAGCTGATTGCCCGCTTCGTTCAGT
TGAAGGAACGATACGAGGAAGTGCAGCGATTCGGCAAATATCATCCCGATTACCGCGATGTGATGAAAGAAGTGCGGGAA
GCGAAACGGGAGCTCGATTTGCACGGAACGGTTGCCGCCTTTAAAGAAGCGGAAAAGGCGCTGCAGCAACTGCTTGACGA
TATTAGCGTACTGATTGGCAAGGCCGTATCGGAACATGTGAAAGTGCCGACCGGGAATCCGTATTTTTTGTCGGCCGGCT
GTTCCGGCGGTTGCGGGAGCGGTGGGAGCTGCGGTTGCCGCACATAG

Upstream 100 bases:

>100_bases
TTTTTACATAATCTTTTTTGGCCATCCTCCCCTCTGACATCTCTCCGCTTTCCATTTTTCTTTCATTCATGGTATGATGA
ATAATGGAGGTGCCAGATTT

Downstream 100 bases:

>100_bases
AAAAAAAGGGGAAGGGACTATGTTTCCAAAACGGCAAGGGATTATCGTTTGGCTTCATTCGCTGAAATATGGGAAACAGC
TGCGCAAGTTCGGCAACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRIATLERIEILDKAEALAKMVVESDVAADYRRAFWRLKQDHRAQQLIARFVQLKERYEEVQRFGKYHPDYRDVMKEVRE
AKRELDLHGTVAAFKEAEKALQQLLDDISVLIGKAVSEHVKVPTGNPYFLSAGCSGGCGSGGSCGCRT

Sequences:

>Translated_148_residues
MRIATLERIEILDKAEALAKMVVESDVAADYRRAFWRLKQDHRAQQLIARFVQLKERYEEVQRFGKYHPDYRDVMKEVRE
AKRELDLHGTVAAFKEAEKALQQLLDDISVLIGKAVSEHVKVPTGNPYFLSAGCSGGCGSGGSCGCRT
>Mature_148_residues
MRIATLERIEILDKAEALAKMVVESDVAADYRRAFWRLKQDHRAQQLIARFVQLKERYEEVQRFGKYHPDYRDVMKEVRE
AKRELDLHGTVAAFKEAEKALQQLLDDISVLIGKAVSEHVKVPTGNPYFLSAGCSGGCGSGGSCGCRT

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16686; Mature: 16686

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIATLERIEILDKAEALAKMVVESDVAADYRRAFWRLKQDHRAQQLIARFVQLKERYEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRFGKYHPDYRDVMKEVREAKRELDLHGTVAAFKEAEKALQQLLDDISVLIGKAVSEHV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KVPTGNPYFLSAGCSGGCGSGGSCGCRT
CCCCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIATLERIEILDKAEALAKMVVESDVAADYRRAFWRLKQDHRAQQLIARFVQLKERYEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQRFGKYHPDYRDVMKEVREAKRELDLHGTVAAFKEAEKALQQLLDDISVLIGKAVSEHV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KVPTGNPYFLSAGCSGGCGSGGSCGCRT
CCCCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]