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The map label for this gene is ykrA [H]

Identifier: 138894590

GI number: 138894590

Start: 992686

End: 993318

Strand: Direct

Name: ykrA [H]

Synonym: GTNG_0920

Alternate gene names: 138894590

Gene position: 992686-993318 (Clockwise)

Preceding gene: 138894589

Following gene: 138894592

Centisome position: 27.96

GC content: 50.55

Gene sequence:

>633_bases
ATGTTTGAACATATACGCCATCGGCTTGGCATTGATTCATTCGTCAGCTTTAACGGGCAATACGTTGTCTTTGAGGGAAG
CGTGCTGCATAAACAACCGCTCCGCCGTGAGAAAGTGAGGATGCTGACGGAAGAGGCCCATCAAAACGGTCACCCGCTCG
TCTTTATGGACGCAGAGGAAATGAGAGCGAGCGTCGACGACCATCCGCATATTCATGTCAGCATGGAGAGCCTGAAATTC
GCCCATCCGCCCGTCGATCCTTTGTATTACGAAAACAAAGACATTTATCAAGCGCTGTTATTTTGCCGCGCTGGAGAAGA
AGCGCCATATGTGCGCAACTATCCGGAGTTCCGTTTTGTCCGCTGGCACGATGTGTCAACTGACGTGCTGCCGGCGGGTG
GATCTAAGGCGGAAGGCATCCGTCTCATGATCGAGAAGCTTGGGATCGACAAAGAGGATGTGTATGCGTTTGGTGACGGA
TTAAATGACATCGAAATGCTGTCATTTGTCGGAACCGGGGTGGCGATGGGCAACGCCCATGAAGAAGTAAAACGGGTTGC
CGATTTTGTCACGAAACCGGTCGATGAAGAAGGGATATGGCACGGACTGAAACAATTGCAATTACTTCCATAA

Upstream 100 bases:

>100_bases
TGACGAGAAAAAACAGTTGCCACCGTCAACTATTGAAGCGATCCGTCAACTGAAACAGGCGGGCGTCTATGTGGCCATCG
CTACCGGACGGGCGCCGTTT

Downstream 100 bases:

>100_bases
AAAAAGCGGTCTCCGCTCATCCAGCGGAACCGCTTTTTGCTTGTGAAAATGCCTAGAAGGTAGGAGAAAACAGCTGTTTT
CCGTCGCGCAGCAGTTCTTA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFEHIRHRLGIDSFVSFNGQYVVFEGSVLHKQPLRREKVRMLTEEAHQNGHPLVFMDAEEMRASVDDHPHIHVSMESLKF
AHPPVDPLYYENKDIYQALLFCRAGEEAPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRLMIEKLGIDKEDVYAFGDG
LNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDEEGIWHGLKQLQLLP

Sequences:

>Translated_210_residues
MFEHIRHRLGIDSFVSFNGQYVVFEGSVLHKQPLRREKVRMLTEEAHQNGHPLVFMDAEEMRASVDDHPHIHVSMESLKF
AHPPVDPLYYENKDIYQALLFCRAGEEAPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRLMIEKLGIDKEDVYAFGDG
LNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDEEGIWHGLKQLQLLP
>Mature_210_residues
MFEHIRHRLGIDSFVSFNGQYVVFEGSVLHKQPLRREKVRMLTEEAHQNGHPLVFMDAEEMRASVDDHPHIHVSMESLKF
AHPPVDPLYYENKDIYQALLFCRAGEEAPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRLMIEKLGIDKEDVYAFGDG
LNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDEEGIWHGLKQLQLLP

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=69, Percent_Identity=47.8260869565217, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI2367265, Length=74, Percent_Identity=41.8918918918919, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24032; Mature: 24032

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEHIRHRLGIDSFVSFNGQYVVFEGSVLHKQPLRREKVRMLTEEAHQNGHPLVFMDAEE
CHHHHHHHCCCHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHCCCCCEEEECHHH
MRASVDDHPHIHVSMESLKFAHPPVDPLYYENKDIYQALLFCRAGEEAPYVRNYPEFRFV
HHHCCCCCCEEEEEHHHCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
RWHDVSTDVLPAGGSKAEGIRLMIEKLGIDKEDVYAFGDGLNDIEMLSFVGTGVAMGNAH
EEECCCCCEECCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHHCCCEECCHH
EEVKRVADFVTKPVDEEGIWHGLKQLQLLP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEHIRHRLGIDSFVSFNGQYVVFEGSVLHKQPLRREKVRMLTEEAHQNGHPLVFMDAEE
CHHHHHHHCCCHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHCCCCCEEEECHHH
MRASVDDHPHIHVSMESLKFAHPPVDPLYYENKDIYQALLFCRAGEEAPYVRNYPEFRFV
HHHCCCCCCEEEEEHHHCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
RWHDVSTDVLPAGGSKAEGIRLMIEKLGIDKEDVYAFGDGLNDIEMLSFVGTGVAMGNAH
EEECCCCCEECCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHHCCCEECCHH
EEVKRVADFVTKPVDEEGIWHGLKQLQLLP
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]